RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 TBC1D15Q8TC07 691 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 ZDHHC1Q8WTX9 485 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 VPS50Q96JG6 964 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 BIRC8Q96P09 236 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 DSEQ9UL01 958 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 ACOT9Q9Y305 439 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 ZCWPW2A0A1B0GU75 182 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 KANSL1LA0AUZ9 987 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 WNT10BO00744 389 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 MDM4O15151 490 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 ZBTB7AO95365 584 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 JCHAINP01591 159 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 SLC7A1P30825 629 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 SLC12A2P55011 1212 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 KCNC4Q03721 635 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 MERTKQ12866 999 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 MAPK11Q15759 364 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 DPYSL2Q16555 572 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 VPS26BQ4G0F5 336 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 CCDC92Q53HC0 331 aaPredicted RBP9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 BTLAQ7Z6A9 289 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 CXorf38Q8TB03 319 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 RNF139Q8WU17 664 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 SGCDQ92629 289 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 TFAP2CQ92754 450 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 TCF12Q99081 682 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 NPLQ9BXD5 320 aaPredicted RBP9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 DGCR6LQ9BY27 220 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 VPS45Q9NRW7 570 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 DPP3Q9NY33 737 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 PPP1R1BQ9UD71 204 aaPredicted RBP9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 VPS51Q9UID3 782 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 DAPK2Q9UIK4 370 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 FADS3Q9Y5Q0 445 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 SQORQ9Y6N5 450 aa9.95□□□□□ -0.82
PTCHD4-202ENST00000398738 SCN9AQ15858 1988 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 MAFO75444 373 aaPredicted RBP9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 CABYRO75952 493 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 AHSGP02765 367 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 KCNA5P22460 613 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 NFKBIAP25963 317 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 OXTRP30559 389 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 NR2C2P49116 596 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 LSM3P62310 102 aaKnown RBP9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 ZNF829Q3KNS6 432 aaPredicted RBP9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 USP41Q3LFD5 358 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 ARHGAP17Q68EM7 881 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 OTOP3Q7RTS5 596 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 PIWIL3Q7Z3Z3 882 aaKnown RBP9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 RAVER1Q8IY67 606 aaKnown RBP9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 CCDC116Q8IYX3 515 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 CNTD1Q8N815 330 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 TXNDC5Q8NBS9 432 aaKnown RBP9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 SPATA22Q8NHS9 363 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 MRPL46Q9H2W6 279 aaKnown RBP9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 ACAD9Q9H845 621 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 PADI4Q9UM07 663 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 A0A087WZ62 844 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 FAM72CH0Y354 149 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 M0QYT0 321 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 ACKR2O00590 384 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 TIMM44O43615 452 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 KDM1AO60341 852 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 SNAP29O95721 258 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 VTNP04004 478 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 SNRPB2P08579 225 aaKnown RBP9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 GSTT2P0CG29 244 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 GSTT2BP0CG30 244 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 HSPA8P11142 646 aaKnown RBP9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 PCNAP12004 261 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 MLNP12872 115 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 NFKB1P19838 968 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 ELK4P28324 431 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 GABRB3P28472 473 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 EEF1DP29692 281 aaKnown RBP9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 CYP51A1Q16850 503 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 FAM83EQ2M2I3 478 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 SLC10A6Q3KNW5 377 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 FAM72AQ5TYM5 149 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 IER5Q5VY09 327 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 FAM72DQ6L9T8 149 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 FAM72BQ86X60 149 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 DNAJB14Q8TBM8 379 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 COPS5Q92905 334 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 NEURL2Q9BR09 285 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 CORO1BQ9BR76 489 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 FDXACB1Q9BRP7 624 aaPredicted RBP9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 NAT9Q9BTE0 207 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 ANKRD60Q9BZ19 345 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 PRDM16Q9HAZ2 1276 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 FANCEQ9HB96 536 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 AKT3Q9Y243 479 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 NRXN2Q9P2S2 1712 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 DHRS12A0PJE2 317 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 HTR3EA5X5Y0 456 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 AURKAO14965 403 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 NRP2O60462 931 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 BCL10O95999 233 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 SLC35E2BP0CK96 405 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 MATN1P21941 496 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms