RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 S100A1P23297 94 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 AXLP30530 894 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 PWP1Q13610 501 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 KCNJ11Q14654 390 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 PAGE2BQ5JRK9 111 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 TMEM198Q66K66 360 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 GLT6D1Q7Z4J2 308 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 SLC44A2Q8IWA5 706 aaPredicted RBP11.11□□□□□ -0.63
HPS4-202ENST00000398145 CPSF7Q8N684 471 aaKnown RBP11.11□□□□□ -0.63
HPS4-202ENST00000398145 PDPRQ8NCN5 879 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 HDAC10Q969S8 669 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 MCRS1Q96EZ8 462 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 KCTD15Q96SI1 283 aaPredicted RBP11.11□□□□□ -0.63
HPS4-202ENST00000398145 ZBED2Q9BTP6 218 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 ADPRHL2Q9NX46 363 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 ZNF112Q9UJU3 913 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 TDRKHQ9Y2W6 561 aaKnown RBP11.11□□□□□ -0.63
HPS4-202ENST00000398145 GNG14A0A1W2PPG7 69 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 LGALS2P05162 132 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 CHRNGP07510 517 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 ARF4P18085 180 aaPredicted RBP11.11□□□□□ -0.63
HPS4-202ENST00000398145 SLC7A1P30825 629 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 CPT1AP50416 773 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 AIF1P55008 147 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 WNT3AP56704 352 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 VPS26BQ4G0F5 336 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 GNASQ5JWF2 1037 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 REP15Q6BDI9 236 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 SH3BP5LQ7L8J4 393 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 SAPCD2Q86UD0 394 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 OFCC1Q8IZS5 231 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 HASPINQ8TF76 798 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 AZIN2Q96A70 460 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 MRPL45Q9BRJ2 306 aaKnown RBP11.11□□□□□ -0.63
HPS4-202ENST00000398145 CCNB1IP1Q9NPC3 277 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 DTLQ9NZJ0 730 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 OPTCQ9UBM4 332 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 CLDN25C9JDP6 229 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 CBX4O00257 560 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 SPTLC1O15269 473 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 CYBBP04839 570 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 ITGB6P18564 788 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 BDNFP23560 247 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 MZF1P28698 734 aaPredicted RBP11.11□□□□□ -0.63
HPS4-202ENST00000398145 TMEM132BQ14DG7 1078 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 ZNF621Q6ZSS3 439 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 GPRIN3Q6ZVF9 776 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 TMEM86AQ8N2M4 240 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 PHTF2Q8N3S3 785 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 PNPT1Q8TCS8 783 aaKnown RBP11.11□□□□□ -0.63
HPS4-202ENST00000398145 ITFG2Q969R8 447 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 P2RX7Q99572 595 aaKnown RBP11.11□□□□□ -0.63
HPS4-202ENST00000398145 COQ7Q99807 217 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 GPATCH1Q9BRR8 931 aaKnown RBP11.11□□□□□ -0.63
HPS4-202ENST00000398145 PCDHAC1Q9H158 963 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 EPB41L4BQ9H329 900 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 MUC13Q9H3R2 512 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 EIF2B3Q9NR50 452 aaKnown RBP11.11□□□□□ -0.63
HPS4-202ENST00000398145 KLQ9UEF7 1012 aa11.11□□□□□ -0.63
HPS4-202ENST00000398145 COL1A1P02452 1464 aaPredicted RBP11.1□□□□□ -0.63
HPS4-202ENST00000398145 ZNF536O15090 1300 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 G3V2T6 193 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 ENDOD1O94919 500 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 AMHP03971 560 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 IRF1P10914 325 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 PRKCHP24723 683 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 OGDHQ02218 1023 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 SIX1Q15475 284 aaPredicted RBP11.1□□□□□ -0.63
HPS4-202ENST00000398145 HIST2H2ACQ16777 129 aaPredicted RBP11.1□□□□□ -0.63
HPS4-202ENST00000398145 SH3PXD2AQ5TCZ1 1133 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 HIST2H2AA3Q6FI13 130 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 GLYATQ6IB77 296 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 ADGRG6Q86SQ4 1221 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 KBTBD8Q8NFY9 601 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 MCFD2Q8NI22 146 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 ENKURQ8TC29 256 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 ROPN1LQ96C74 230 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 ASB9Q96DX5 294 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 PPP3R2Q96LZ3 170 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 OR52B2Q96RD2 323 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 CHID1Q9BWS9 393 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 GLOD4Q9HC38 313 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 RHOCP08134 193 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 UMPSP11172 480 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 RXRGP48443 463 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 PURAQ00577 322 aaKnown RBP11.1□□□□□ -0.63
HPS4-202ENST00000398145 CDH18Q13634 790 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 CCNYL2Q5T2Q4 361 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 CATSPERGQ6ZRH7 1159 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 MPP5Q8N3R9 675 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 C2orf69Q8N8R5 385 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 DNAJB3Q8WWF6 145 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 PROX1Q92786 737 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 AGAP2Q99490 1192 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 TSEN34Q9BSV6 310 aaKnown RBP11.1□□□□□ -0.63
HPS4-202ENST00000398145 NIFKQ9BYG3 293 aaKnown RBP11.1□□□□□ -0.63
HPS4-202ENST00000398145 EHD3Q9NZN3 535 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 TRIM17Q9Y577 477 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 SNPHO15079 494 aa11.1□□□□□ -0.63
HPS4-202ENST00000398145 IDH3BO43837 385 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms