RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 HMGB1P1B2RPK0 211 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 KAT7O95251 611 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 SP100P23497 879 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 SERPINA4P29622 427 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 GRIA2P42262 883 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 SLCO1A2P46721 670 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 GRIA4P48058 902 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 ACVR1Q04771 509 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 BCL2L1Q07817 233 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 NAB1Q13506 487 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 QPCTQ16769 361 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 ACCSLQ4AC99 568 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 ARMC12Q5T9G4 340 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 CES3Q6UWW8 571 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 Q6ZVU0 165 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 LRRC6Q86X45 466 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 SUGP1Q8IWZ8 645 aaKnown RBP19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 UNC5BQ8IZJ1 945 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 OR6K2Q8NGY2 324 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 DCAKDQ8WVC6 231 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 PIH1D2Q8WWB5 315 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 HLA-CQ95604 372 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 ZNF641Q96N77 438 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 PAFAH2Q99487 392 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 SLC8A2Q9UPR5 921 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 A0A0C4DFX4 3053 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 CXorf49A8MYA2 514 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 RNF40O75150 1001 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 RAD51Q06609 339 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 MGAT5Q09328 741 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 LEXMQ3ZCV2 418 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 TSTD2Q5T7W7 516 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 KIAA0930Q6ICG6 404 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 MARK2Q7KZI7 788 aaKnown RBP19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 LPCAT1Q8NF37 534 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 TTC8Q8TAM2 541 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 RMDN1Q96DB5 314 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 PSMC3IPQ9P2W1 217 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 CTNNAL1Q9UBT7 734 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 ZNF180Q9UJW8 692 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 PLA2G4CQ9UP65 541 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 PCDHB9Q9Y5E1 797 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 SPO11Q9Y5K1 396 aa19.6■□□□□ 0.73
PDLIM2-205ENST00000397761 BPTFQ12830 3046 aa19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 ATG2BQ96BY7 2078 aa19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 SMIM23A6NLE4 172 aa19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 POC1B-GALNT4F8VUJ3 575 aa19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 RGS16O15492 202 aaPredicted RBP19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 PIGNO95427 931 aa19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 ARNTP27540 789 aa19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 OAS2P29728 719 aaKnown RBP19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 GKP32189 559 aa19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 ARCN1P48444 511 aaKnown RBP19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 SFTPA1Q8IWL2 248 aa19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 PTPRN2Q92932 1015 aa19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 LRIG1Q96JA1 1093 aa19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 TMEM245Q9H330 911 aa19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 KCNK12Q9HB15 430 aa19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 HACD3Q9P035 362 aa19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 HCN2Q9UL51 889 aa19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 PPIL1Q9Y3C6 166 aa19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 STARD13Q9Y3M8 1113 aa19.59■□□□□ 0.73
PDLIM2-205ENST00000397761 A0A1W2PQ67 120 aa19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 SIN3BO75182 1162 aa19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 PIAS1O75925 651 aa19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 MSH2P43246 934 aa19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 RECQLP46063 649 aaPredicted RBP19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 ST8SIA6P61647 398 aa19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 HNRNPA1L2Q32P51 320 aaKnown RBP19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 PDPK2PQ6A1A2 396 aa19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 ESRP1Q6NXG1 681 aaKnown RBP19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 SLC26A11Q86WA9 606 aa19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 RYBPQ8N488 228 aaPredicted RBP19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 SLC44A3Q8N4M1 653 aa19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 CHST14Q8NCH0 376 aa19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 OR13J1Q8NGT2 312 aa19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 CSGALNACT1Q8TDX6 532 aa19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 UCMAQ8WVF2 138 aa19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 DNASE1L2Q92874 299 aa19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 HEPHQ9BQS7 1158 aa19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 STMN4Q9H169 189 aaPredicted RBP19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 CENPHQ9H3R5 247 aa19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 SUV39H2Q9H5I1 410 aa19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 MAGEE1Q9HCI5 957 aa19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 THAP10Q9P2Z0 257 aaPredicted RBP19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 WASF2Q9Y6W5 498 aa19.58■□□□□ 0.72
PDLIM2-205ENST00000397761 A0A0J9YYE9 177 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 TSPAN11A1L157 253 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 TBC1D3BA6NDS4 549 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 TRBC1P01850 177 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 APODP05090 189 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 PRKCGP05129 697 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 ENPP2Q13822 863 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 SEPT6Q14141 434 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 ZNF234Q14588 700 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 SKIV2LQ15477 1246 aaKnown RBP19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 TAF1AQ15573 450 aaPredicted RBP19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 CNGA3Q16281 694 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 KCNMB4Q86W47 210 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms