RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 AQP4P55087 323 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 SP2Q02086 613 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 MPP2Q14168 576 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 SQLEQ14534 574 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 ZNF460Q14592 562 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 DDR2Q16832 855 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 CLEC6AQ6EIG7 209 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 HERC6Q8IVU3 1022 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 SLC4A11Q8NBS3 891 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 FNIP1Q8TF40 1166 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 GIPC3Q8TF64 312 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 GTF3C2Q8WUA4 911 aaPredicted RBP10.82□□□□□ -0.68
CCDC40-204ENST00000397545 FCRL2Q96LA5 508 aaPredicted RBP10.82□□□□□ -0.68
CCDC40-204ENST00000397545 LPIN3Q9BQK8 851 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 RSL24D1Q9UHA3 163 aaKnown RBP10.82□□□□□ -0.68
CCDC40-204ENST00000397545 DUSP12Q9UNI6 340 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 TIMM22Q9Y584 194 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 SNX10Q9Y5X0 201 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 CXCL11O14625 94 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 ALDH2P05091 517 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 MLNP12872 115 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 PSEN2P49810 448 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 MPP1Q00013 466 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 PTP4A2Q12974 167 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 MAPKAPK3Q16644 382 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 DEFB115Q30KQ5 88 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 TREML2Q5T2D2 321 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 ARMC3Q5W041 872 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 TMEM198Q66K66 360 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 CUZD1Q86UP6 607 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 CCDC185Q8N715 623 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 DNAJC1Q96KC8 554 aaKnown RBP10.82□□□□□ -0.68
CCDC40-204ENST00000397545 PPM1MQ96MI6 270 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 AGAP2Q99490 1192 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 FBXO44Q9H4M3 255 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 DHX33Q9H6R0 707 aaKnown RBP10.82□□□□□ -0.68
CCDC40-204ENST00000397545 ARL15Q9NXU5 204 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 GALNT8Q9NY28 637 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 OPTCQ9UBM4 332 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 UBA2Q9UBT2 640 aaPredicted RBP10.82□□□□□ -0.68
CCDC40-204ENST00000397545 PRPF19Q9UMS4 504 aaKnown RBP10.82□□□□□ -0.68
CCDC40-204ENST00000397545 COQ4Q9Y3A0 265 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 TRIM17Q9Y577 477 aa10.82□□□□□ -0.68
CCDC40-204ENST00000397545 H3BN98 237 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 MSH3P20585 1137 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 SOX6P35712 828 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 BRCC3P46736 316 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 DMPKQ09013 629 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 CPSF6Q16630 551 aaKnown RBP eCLIP10.81□□□□□ -0.68
CCDC40-204ENST00000397545 ARHGAP17Q68EM7 881 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 ANKS3Q6ZW76 656 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 SPPL2CQ8IUH8 684 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 SFRP1Q8N474 314 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 SELENOMQ8WWX9 145 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 SDCBP2Q9H190 292 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 ST6GALNAC4Q9H4F1 302 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 EPS8L2Q9H6S3 715 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 POMPQ9Y244 141 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 CXorf49A8MYA2 514 aaPredicted RBP10.81□□□□□ -0.68
CCDC40-204ENST00000397545 KPNA4O00629 521 aaPredicted RBP10.81□□□□□ -0.68
CCDC40-204ENST00000397545 AZIN1O14977 448 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 MAGEC1O60732 1142 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 MT-CYBP00156 380 aaPredicted RBP10.81□□□□□ -0.68
CCDC40-204ENST00000397545 AMHP03971 560 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 RRM2P31350 389 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 GALNT3Q14435 633 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 AP5B1Q2VPB7 878 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 STXBP5Q5T5C0 1151 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 FAM45BPQ6NSW5 357 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 C6orf89Q6UWU4 347 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 TDRPQ86YL5 185 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 MRPS31Q92665 395 aaKnown RBP10.81□□□□□ -0.68
CCDC40-204ENST00000397545 NACC2Q96BF6 587 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 KCTD15Q96SI1 283 aaPredicted RBP10.81□□□□□ -0.68
CCDC40-204ENST00000397545 TCF12Q99081 682 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 TMEM106CQ9BVX2 250 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 ABCB10Q9NRK6 738 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 ZMYND8Q9ULU4 1186 aaPredicted RBP10.81□□□□□ -0.68
CCDC40-204ENST00000397545 PRR23D1E9PI22 279 aaPredicted RBP10.81□□□□□ -0.68
CCDC40-204ENST00000397545 TGDSO95455 350 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 VNN1O95497 513 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 PRR23D2P0DMB1 279 aaPredicted RBP10.81□□□□□ -0.68
CCDC40-204ENST00000397545 MAPK1P28482 360 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 ST13P50502 369 aaKnown RBP10.81□□□□□ -0.68
CCDC40-204ENST00000397545 CLCN5P51795 746 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 RPL38P63173 70 aaKnown RBP10.81□□□□□ -0.68
CCDC40-204ENST00000397545 HPCAP84074 193 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 PRKG2Q13237 762 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 NR1D2Q14995 579 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 SLC25A52Q3SY17 297 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 TEX44Q53QW1 395 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 FSTL4Q6MZW2 842 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 ABRAXAS1Q6UWZ7 409 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 RALGPS2Q86X27 583 aaPredicted RBP10.81□□□□□ -0.68
CCDC40-204ENST00000397545 CACUL1Q86Y37 369 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 RAB42Q8N4Z0 105 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 OR7A2PQ8NGA2 310 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 RTKNQ9BST9 563 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 NENFQ9UMX5 172 aa10.81□□□□□ -0.68
CCDC40-204ENST00000397545 TPRKBQ9Y3C4 175 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms