RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 RIMS3Q9UJD0 308 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 KIAA1257Q9ULG3 409 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 PPP2R3BQ9Y5P8 575 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 MYO15AQ9UKN7 3530 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 ZNF839A8K0R7 811 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 F8W810 466 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 H0YJX3 145 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 STX16-NPEPL1H3BU86 382 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CXCL11O14625 94 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 ZBTB14O43829 449 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 SNNO75324 88 aaPredicted RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 GPR32O75388 356 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 ATE1O95260 518 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 PRKCGP05129 697 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 ITGAXP20702 1163 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 MAGEA3P43357 314 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 KRT6CP48668 564 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 PLK1P53350 603 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 NAGLUP54802 743 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 PKNOX1P55347 436 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 TBX4P57082 545 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 BNIP3Q12983 259 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CCL14Q16627 93 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 FAM187BQ17R55 369 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 OTUD1Q5VV17 481 aaPredicted RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 SIGIRRQ6IA17 410 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 PAQR9Q6ZVX9 377 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 GPR142Q7Z601 462 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 ZNF354CQ86Y25 554 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 ELMOD1Q8N336 334 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 SLC15A4Q8N697 577 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 SLC43A3Q8NBI5 491 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 IPMKQ8NFU5 416 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 NPLOC4Q8TAT6 608 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CAPSLQ8WWF8 208 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 RTP4Q96DX8 246 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 PCED1BQ96HM7 432 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 GAD1Q99259 594 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 SORT1Q99523 831 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 SLC39A3Q9BRY0 314 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 MROQ9BYG7 248 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 NFKBIZQ9BYH8 718 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 FRMD8Q9BZ67 464 aaPredicted RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 TKTL2Q9H0I9 626 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CDH19Q9H159 772 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CUEDC1Q9NWM3 386 aaPredicted RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 CRNNQ9UBG3 495 aaPredicted RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 POU2F3Q9UKI9 436 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 UBQLN1Q9UMX0 589 aaKnown RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 ARHGAP26Q9UNA1 814 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 RNF11Q9Y3C5 154 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 IPPQ9Y573 584 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 LTBP3Q9NS15 1303 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 ANKRD12Q6UB98 2062 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 A0A1W2PPW3 197 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 A0A1W2PQ67 120 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 NEMP2A6NFY4 417 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 H3BMQ9 156 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 DPYSL4O14531 572 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 MSI1O43347 362 aaKnown RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 SNAP91O60641 907 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 GLRA3O75311 464 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 GUCY1B2O75343 617 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 PMPCBO75439 489 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 RSL1D1O76021 490 aaKnown RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 MYO1DO94832 1006 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 VAPBO95292 243 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 POMCP01189 267 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 FYNP06241 537 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 C2P06681 752 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 NPR3P17342 541 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 PTPN1P18031 435 aaKnown RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 PGAM1P18669 254 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 HDCP19113 662 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 TPSB2P20231 275 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CYP2B6P20813 491 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 MPSTP25325 297 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 PTPN3P26045 913 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 PTPN9P43378 593 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 NR2C2P49116 596 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 NUDT2P50583 147 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CSE1LP55060 971 aaKnown RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 ATP6V0D1P61421 351 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 MRPS22P82650 360 aaKnown RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 POU5F1BQ06416 359 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 FLOT2Q14254 428 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 OXA1LQ15070 435 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 TPSAB1Q15661 275 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 ZNF792Q3KQV3 632 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 AGAP7PQ5VUJ5 663 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 C9orf131Q5VYM1 1079 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CCSAPQ6IQ19 270 aaPredicted RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 SDE2Q6IQ49 451 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 KIAA2013Q8IYS2 634 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CADM3Q8N126 398 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 LINC01465Q8N7H1 131 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 GOLM1Q8NBJ4 401 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 MCUQ8NE86 351 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 SCAMP5Q8TAC9 235 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms