RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 FBXL19Q6PCT2 694 aa23.76■■□□□ 1.39
TSPAN4-203ENST00000397397 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.76■■□□□ 1.39
TSPAN4-203ENST00000397397 PPP1R21Q6ZMI0 780 aa23.76■■□□□ 1.39
TSPAN4-203ENST00000397397 TTC7BQ86TV6 843 aa23.76■■□□□ 1.39
TSPAN4-203ENST00000397397 RASSF3Q86WH2 238 aa23.76■■□□□ 1.39
TSPAN4-203ENST00000397397 PIH1D2Q8WWB5 315 aa23.76■■□□□ 1.39
TSPAN4-203ENST00000397397 RPL26L1Q9UNX3 145 aaKnown RBP23.76■■□□□ 1.39
TSPAN4-203ENST00000397397 NCKAP1Q9Y2A7 1128 aa23.76■■□□□ 1.39
TSPAN4-203ENST00000397397 UPK3BL1B0FP48 263 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 UPK3BL2E5RIL1 263 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 SEC31AO94979 1220 aaKnown RBP23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 RHOXF2BP0C7M4 288 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 HLA-DPA1P20036 260 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 P2RY2P41231 377 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 CHRNA4P43681 627 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 PXNP49023 591 aaPredicted RBP23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 CDK16Q00536 496 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 GUCY2DQ02846 1103 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 SLC1A5Q15758 541 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 LRRC73Q5JTD7 316 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 SIRPB2Q5JXA9 342 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 RANBP10Q6VN20 620 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 LINC00523Q86TU6 105 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 C1orf210Q8IVY1 113 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 NDUFAF2Q8N183 169 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 BBOF1Q8ND07 529 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 PRSS33Q8NF86 280 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 RHOXF2Q9BQY4 288 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 TPSD1Q9BZJ3 242 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 PRMT8Q9NR22 394 aaPredicted RBP23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 SERGEFQ9UGK8 458 aa23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 DMGDHQ9UI17 866 aaKnown RBP23.75■■□□□ 1.39
TSPAN4-203ENST00000397397 PRKCGP05129 697 aa23.74■■□□□ 1.39
TSPAN4-203ENST00000397397 ATXN1LP0C7T5 689 aaKnown RBP23.74■■□□□ 1.39
TSPAN4-203ENST00000397397 ADRB3P13945 408 aa23.74■■□□□ 1.39
TSPAN4-203ENST00000397397 CTPS1P17812 591 aa23.74■■□□□ 1.39
TSPAN4-203ENST00000397397 GRIA4P48058 902 aa23.74■■□□□ 1.39
TSPAN4-203ENST00000397397 ITGA8P53708 1063 aa23.74■■□□□ 1.39
TSPAN4-203ENST00000397397 CCDC15Q0P6D6 951 aa23.74■■□□□ 1.39
TSPAN4-203ENST00000397397 QPCTQ16769 361 aa23.74■■□□□ 1.39
TSPAN4-203ENST00000397397 UGP2Q16851 508 aa23.74■■□□□ 1.39
TSPAN4-203ENST00000397397 USP30Q70CQ3 517 aa23.74■■□□□ 1.39
TSPAN4-203ENST00000397397 NAT8LQ8N9F0 302 aa23.74■■□□□ 1.39
TSPAN4-203ENST00000397397 SPOCK2Q92563 424 aa23.74■■□□□ 1.39
TSPAN4-203ENST00000397397 ITM2CQ9NQX7 267 aa23.74■■□□□ 1.39
TSPAN4-203ENST00000397397 WHRNQ9P202 907 aa23.74■■□□□ 1.39
TSPAN4-203ENST00000397397 EBF1Q9UH73 591 aa23.74■■□□□ 1.39
TSPAN4-203ENST00000397397 ANAPC5Q9UJX4 755 aa23.74■■□□□ 1.39
TSPAN4-203ENST00000397397 ANKRD66B4E2M5 251 aa23.73■■□□□ 1.39
TSPAN4-203ENST00000397397 NDC80O14777 642 aa23.73■■□□□ 1.39
TSPAN4-203ENST00000397397 TMEM63AO94886 807 aa23.73■■□□□ 1.39
TSPAN4-203ENST00000397397 FGF1P05230 155 aa23.73■■□□□ 1.39
TSPAN4-203ENST00000397397 ITIH2P19823 946 aa23.73■■□□□ 1.39
TSPAN4-203ENST00000397397 GRIA1P42261 906 aa23.73■■□□□ 1.39
TSPAN4-203ENST00000397397 ABL2P42684 1182 aa23.73■■□□□ 1.39
TSPAN4-203ENST00000397397 SARNPP82979 210 aaKnown RBP23.73■■□□□ 1.39
TSPAN4-203ENST00000397397 CALCOCO2Q13137 446 aa23.73■■□□□ 1.39
TSPAN4-203ENST00000397397 PIP5KL1Q5T9C9 394 aa23.73■■□□□ 1.39
TSPAN4-203ENST00000397397 TSSK4Q6SA08 328 aa23.73■■□□□ 1.39
TSPAN4-203ENST00000397397 KBTBD6Q86V97 674 aa23.73■■□□□ 1.39
TSPAN4-203ENST00000397397 HOOK3Q86VS8 718 aa23.73■■□□□ 1.39
TSPAN4-203ENST00000397397 OR52K1Q8NGK4 314 aa23.73■■□□□ 1.39
TSPAN4-203ENST00000397397 NEUROG2Q9H2A3 272 aa23.73■■□□□ 1.39
TSPAN4-203ENST00000397397 ZDBF2Q9HCK1 2354 aa23.73■■□□□ 1.39
TSPAN4-203ENST00000397397 EPB41L5Q9HCM4 733 aa23.73■■□□□ 1.39
TSPAN4-203ENST00000397397 CD93Q9NPY3 652 aa23.73■■□□□ 1.39
TSPAN4-203ENST00000397397 A0A0J9YYE9 177 aa23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 ESYT3A0FGR9 886 aa23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 GOLGA8MH3BSY2 632 aa23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 TRBC1P01850 177 aa23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 NFKBIAP25963 317 aa23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 TPMTP51580 245 aa23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 DRG2P55039 364 aaKnown RBP23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 MORF4L2Q15014 288 aa23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 AGBL4Q5VU57 503 aa23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 DENND5AQ6IQ26 1287 aa23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 HIBCHQ6NVY1 386 aaPredicted RBP23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 USP45Q70EL2 814 aa23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 FAM124AQ86V42 546 aa23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 DNAAF3Q8N9W5 541 aa23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 RAB7BQ96AH8 199 aa23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 SMIM14Q96QK8 99 aa23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 PCDH12Q9NPG4 1184 aa23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 PIH1D1Q9NWS0 290 aaKnown RBP23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 GRHL1Q9NZI5 618 aa23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 USP36Q9P275 1121 aaKnown RBP23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 PPIL1Q9Y3C6 166 aa23.72■■□□□ 1.39
TSPAN4-203ENST00000397397 AXIN1O15169 862 aa23.71■■□□□ 1.39
TSPAN4-203ENST00000397397 ALPIP09923 528 aa23.71■■□□□ 1.39
TSPAN4-203ENST00000397397 SUOXP51687 545 aa23.71■■□□□ 1.39
TSPAN4-203ENST00000397397 TUBB4BP68371 445 aa23.71■■□□□ 1.39
TSPAN4-203ENST00000397397 FAM193AP78312 1265 aa23.71■■□□□ 1.39
TSPAN4-203ENST00000397397 CSTF1Q05048 431 aaKnown RBP23.71■■□□□ 1.39
TSPAN4-203ENST00000397397 CDH17Q12864 832 aa23.71■■□□□ 1.39
TSPAN4-203ENST00000397397 TRADDQ15628 312 aa23.71■■□□□ 1.39
TSPAN4-203ENST00000397397 ERAP2Q6P179 960 aa23.71■■□□□ 1.39
TSPAN4-203ENST00000397397 MCUQ8NE86 351 aa23.71■■□□□ 1.39
TSPAN4-203ENST00000397397 ARNT2Q9HBZ2 717 aa23.71■■□□□ 1.39
TSPAN4-203ENST00000397397 CASS4Q9NQ75 786 aa23.71■■□□□ 1.39
TSPAN4-203ENST00000397397 FZD4Q9ULV1 537 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms