RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 CYP4F8P98187 520 aa17.52■□□□□ 0.39
MCF2L-208ENST00000397030 PRKCZQ05513 592 aa17.52■□□□□ 0.39
MCF2L-208ENST00000397030 WDR59Q6PJI9 974 aa17.52■□□□□ 0.39
MCF2L-208ENST00000397030 TNS4Q8IZW8 715 aa17.52■□□□□ 0.39
MCF2L-208ENST00000397030 MAML3Q96JK9 1138 aa17.52■□□□□ 0.39
MCF2L-208ENST00000397030 PTPN18Q99952 460 aa17.52■□□□□ 0.39
MCF2L-208ENST00000397030 AP4S1Q9Y587 144 aa17.52■□□□□ 0.39
MCF2L-208ENST00000397030 CAPN6Q9Y6Q1 641 aa17.52■□□□□ 0.39
MCF2L-208ENST00000397030 ZMYM2Q9UBW7 1377 aa17.52■□□□□ 0.39
MCF2L-208ENST00000397030 SERPINE1P05121 402 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 BMP7P18075 431 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 IDSP22304 550 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 ALDH4A1P30038 563 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 NIPA1Q7RTP0 329 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 EEF1AKMT1Q8WVE0 214 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 DNASE1L2Q92874 299 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 GOT1P17174 413 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 CCND1P24385 295 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 RCVRNP35243 200 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 FAAP100Q0VG06 881 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 USP4Q13107 963 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 C9orf64Q5T6V5 341 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 FAM91A1Q658Y4 838 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 KIAA0408Q6ZU52 694 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 SPATA5L1Q9BVQ7 753 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 CCNA2P20248 432 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 DHRS1Q96LJ7 313 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 EPS8L2Q9H6S3 715 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 ATXN2Q99700 1313 aaKnown RBP17.51■□□□□ 0.39
MCF2L-208ENST00000397030 NPEPPSL1A6NEC2 478 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 ANXA6P08133 673 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 SLURP2P0DP57 97 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 ATAD1Q8NBU5 361 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 C1orf50Q9BV19 199 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 CAB39LQ9H9S4 337 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 PTGFRNQ9P2B2 879 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 ENO4A6NNW6 628 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 ALOX12P18054 663 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 SLC12A3P55017 1021 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 SLC9A6Q92581 669 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 ATG10Q9H0Y0 220 aa17.51■□□□□ 0.39
MCF2L-208ENST00000397030 TARBP1Q13395 1621 aaKnown RBP17.51■□□□□ 0.39
MCF2L-208ENST00000397030 LINC00032P0C843 101 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 CXCR3P49682 368 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 TOB1P50616 345 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-208ENST00000397030 LRRC73Q5JTD7 316 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 CHST15Q7LFX5 561 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-208ENST00000397030 ADGRG6Q86SQ4 1221 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 NKAPQ8N5F7 415 aaKnown RBP17.5■□□□□ 0.39
MCF2L-208ENST00000397030 ZNF541Q9H0D2 1346 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 CDT1Q9H211 546 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 OR10H3O60404 316 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 PTPN2P17706 415 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 ZNF132P52740 706 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 DPYSL3Q14195 570 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 TCP10LQ8TDR4 215 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 NDRG1Q92597 394 aaKnown RBP17.5■□□□□ 0.39
MCF2L-208ENST00000397030 MIEF2Q96C03 454 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 TEKT5Q96M29 485 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 TMEM134Q9H6X4 195 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 CHMP1AQ9HD42 196 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-208ENST00000397030 HGFP14210 728 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 LRPAP1P30533 357 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 Q8N9G6 341 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-208ENST00000397030 HCAR2Q8TDS4 363 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 TRMT13Q9NUP7 481 aaKnown RBP17.5■□□□□ 0.39
MCF2L-208ENST00000397030 TBC1D14Q9P2M4 693 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 POLR1AO95602 1720 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-208ENST00000397030 GNPDA1P46926 289 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 TMED10P49755 219 aaKnown RBP17.5■□□□□ 0.39
MCF2L-208ENST00000397030 PSMD4P55036 377 aaKnown RBP17.5■□□□□ 0.39
MCF2L-208ENST00000397030 SGCBQ16585 318 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 CHSY3Q70JA7 882 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 C17orf64Q86WR6 236 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 IRS2Q9Y4H2 1338 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 TRIM64A6NGJ6 449 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 QSOX1O00391 747 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 TREHO43280 583 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 MAFO75444 373 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-208ENST00000397030 PDE5AO76074 875 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 LDLRP01130 860 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 SLC9A9Q8IVB4 645 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 SLC38A2Q96QD8 506 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 SYT17Q9BSW7 474 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 TMEM138Q9NPI0 162 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 TMEM216Q9P0N5 145 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 OR6C75A6NL08 312 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 OR5F1O95221 314 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 KDELR1P24390 212 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 ELOAQ14241 798 aaKnown RBP17.5■□□□□ 0.39
MCF2L-208ENST00000397030 KCTD8Q6ZWB6 473 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 ATCAYQ86WG3 371 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 CFAP206Q8IYR0 622 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 OFCC1Q8IZS5 231 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 UBR7Q8N806 425 aa17.5■□□□□ 0.39
MCF2L-208ENST00000397030 COL5A2P05997 1499 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-208ENST00000397030 MEGF6O75095 1541 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 LOC100506127A0A0U1RQW1 187 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 LIN7AO14910 233 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-208ENST00000397030 FKBP1BP68106 108 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms