RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 ING2Q9H160 280 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 CYP3A43Q9HB55 503 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 NUP205Q92621 2012 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 KIAA1217Q5T5P2 1943 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 FAM95CA0A1B0GW59 222 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 HTR3EA5X5Y0 456 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 H2AFYO75367 372 aaKnown RBP9.9□□□□□ -0.82
TRIM39-203ENST00000396547 C8BP07358 591 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 FASP25445 335 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 LMO2P25791 158 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 PTPN3P26045 913 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 GABRB3P28472 473 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 TPD52P55327 224 aaPredicted RBP9.9□□□□□ -0.82
TRIM39-203ENST00000396547 TAS2R39P59534 338 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 STX1BP61266 288 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 LSM3P62310 102 aaKnown RBP9.9□□□□□ -0.82
TRIM39-203ENST00000396547 TUBA4AP68366 448 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 NAB1Q13506 487 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 LRP8Q14114 963 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 MAPK11Q15759 364 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 ARHGAP17Q68EM7 881 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 ANKRD26P1Q6NSI1 321 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 PPP4R4Q6NUP7 873 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 BTLAQ7Z6A9 289 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 ZC3HC1Q86WB0 502 aaKnown RBP9.9□□□□□ -0.82
TRIM39-203ENST00000396547 IFNL1Q8IU54 200 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 DHRSXQ8N5I4 330 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 SLC35F5Q8WV83 523 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 SGCDQ92629 289 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 NEURL2Q9BR09 285 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 CORO1BQ9BR76 489 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 RNF186Q9NXI6 227 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 VPS51Q9UID3 782 aa9.9□□□□□ -0.82
TRIM39-203ENST00000396547 RBM47A0AV96 593 aaKnown RBP9.89□□□□□ -0.83
TRIM39-203ENST00000396547 SLCO1B7G3V0H7 640 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 CLDN5O00501 218 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 AURKAO14965 403 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 MT-CYBP00156 380 aaPredicted RBP9.89□□□□□ -0.83
TRIM39-203ENST00000396547 GSTT2P0CG29 244 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 GSTT2BP0CG30 244 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 PCNAP12004 261 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 ERCC2P18074 760 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 CCNA2P20248 432 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 BACE1P56817 501 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 LAMC2Q13753 1193 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 BTG3Q14201 252 aaPredicted RBP9.89□□□□□ -0.83
TRIM39-203ENST00000396547 C6orf10Q5SRN2 563 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 ESRP1Q6NXG1 681 aaKnown RBP9.89□□□□□ -0.83
TRIM39-203ENST00000396547 DDIASQ8IXT1 998 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 CMTR2Q8IYT2 770 aaKnown RBP9.89□□□□□ -0.83
TRIM39-203ENST00000396547 TMEM151AQ8N4L1 468 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 SLC2A14Q8TDB8 520 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 HPS1Q92902 700 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 C18orf25Q96B23 403 aaPredicted RBP9.89□□□□□ -0.83
TRIM39-203ENST00000396547 CCDC90BQ9GZT6 254 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 KLHL25Q9H0H3 589 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 OSBPL2Q9H1P3 480 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 C2orf40Q9H1Z8 148 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 CDHR5Q9HBB8 845 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 SLC2A6Q9UGQ3 507 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 CNOT11Q9UKZ1 510 aaKnown RBP9.89□□□□□ -0.83
TRIM39-203ENST00000396547 SLC27A5Q9Y2P5 690 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 CSADQ9Y600 493 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 PGK2P07205 417 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 PSMA4P25789 261 aaKnown RBP9.89□□□□□ -0.83
TRIM39-203ENST00000396547 NFKBIAP25963 317 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 BCAT1P54687 386 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 RAD23AP54725 363 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 HTRA3P83110 453 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 GHRHRQ02643 423 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 ADIGQ0VDE8 80 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 SPIDRQ14159 915 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 ZNF618Q5T7W0 954 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 TSTD2Q5T7W7 516 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 SYPL2Q5VXT5 272 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 TMEM110Q86TL2 294 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 LDB1Q86U70 411 aaPredicted RBP9.89□□□□□ -0.83
TRIM39-203ENST00000396547 TMEM135Q86UB9 458 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 EPHX4Q8IUS5 362 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 ANKRD52Q8NB46 1076 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 SLC7A14Q8TBB6 771 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 STYXQ8WUJ0 223 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 SLC35B4Q969S0 331 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 HDAC10Q969S8 669 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 TAMM41Q96BW9 452 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 ZNF385DQ9H6B1 395 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 PKD2L2Q9NZM6 624 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 CCL22O00626 93 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 DPYSL4O14531 572 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 PMPCBO75439 489 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 AP2A1O95782 977 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 SLC4A1P02730 911 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 APOA4P06727 396 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 PTPRAP18433 802 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 POLR2IP36954 125 aaKnown RBP9.89□□□□□ -0.83
TRIM39-203ENST00000396547 PPP1R8Q12972 351 aaKnown RBP9.89□□□□□ -0.83
TRIM39-203ENST00000396547 ZBTB17Q13105 803 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 RFTN1Q14699 578 aaPredicted RBP9.89□□□□□ -0.83
TRIM39-203ENST00000396547 HERC3Q15034 1050 aa9.89□□□□□ -0.83
TRIM39-203ENST00000396547 IMPG1Q17R60 797 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms