RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 IL21Q9HBE4 155 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 MAFFQ9ULX9 164 aa12.22□□□□□ -0.45
ITGB1-202ENST00000396033 PLXNA4Q9HCM2 1894 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 TYW5A2RUC4 315 aaKnown RBP12.21□□□□□ -0.45
ITGB1-202ENST00000396033 H0Y626 953 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 BUD23O43709 281 aaKnown RBP12.21□□□□□ -0.45
ITGB1-202ENST00000396033 NDST3O95803 873 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 COL6A2P12110 1019 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 CLCN5P51795 746 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 LAMB3Q13751 1172 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 LRRC8EQ6NSJ5 796 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 CILP2Q8IUL8 1156 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 RDH11Q8TC12 318 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 AGAP11Q8TF27 550 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 ARMC5Q96C12 935 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 DNAJC1Q96KC8 554 aaKnown RBP12.21□□□□□ -0.45
ITGB1-202ENST00000396033 STOML2Q9UJZ1 356 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 OR51F1A6NGY5 319 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 EIF4E1BA6NMX2 242 aaKnown RBP12.21□□□□□ -0.45
ITGB1-202ENST00000396033 INSIG1O15503 277 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 TGM5O43548 720 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 TRIM13O60858 407 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 LATS1O95835 1130 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 CNPP09543 421 aaKnown RBP12.21□□□□□ -0.45
ITGB1-202ENST00000396033 LINGO3P0C6S8 592 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 HDCP19113 662 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 GABRR2P28476 465 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 ARRB2P32121 409 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 LEPRP48357 1165 aaKnown RBP12.21□□□□□ -0.45
ITGB1-202ENST00000396033 CYP4F8P98187 520 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 ZYG11AQ6WRX3 759 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 NECAB2Q7Z6G3 386 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 INPP5DQ92835 1189 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 RAB3IPQ96QF0 476 aaPredicted RBP12.21□□□□□ -0.45
ITGB1-202ENST00000396033 OMDQ99983 421 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 ARL8BQ9NVJ2 186 aa12.21□□□□□ -0.45
ITGB1-202ENST00000396033 A0A087X1B8 175 aa12.21□□□□□ -0.46
ITGB1-202ENST00000396033 LILRB3O75022 631 aa12.21□□□□□ -0.46
ITGB1-202ENST00000396033 H2AFYO75367 372 aaKnown RBP12.21□□□□□ -0.46
ITGB1-202ENST00000396033 SMNDC1O75940 238 aaKnown RBP eCLIP12.21□□□□□ -0.463e-8■□□□□ 9.4
ITGB1-202ENST00000396033 HSPA4LO95757 839 aa12.21□□□□□ -0.46
ITGB1-202ENST00000396033 CTSAP10619 480 aa12.21□□□□□ -0.46
ITGB1-202ENST00000396033 CYTH1Q15438 398 aa12.21□□□□□ -0.46
ITGB1-202ENST00000396033 SLC14A2Q15849 920 aa12.21□□□□□ -0.46
ITGB1-202ENST00000396033 NAPRTQ6XQN6 538 aa12.21□□□□□ -0.46
ITGB1-202ENST00000396033 ATG14Q6ZNE5 492 aa12.21□□□□□ -0.46
ITGB1-202ENST00000396033 LDB1Q86U70 411 aaPredicted RBP12.21□□□□□ -0.46
ITGB1-202ENST00000396033 SPATA6LQ8N4H0 392 aa12.21□□□□□ -0.46
ITGB1-202ENST00000396033 PNPLA1Q8N8W4 532 aa12.21□□□□□ -0.46
ITGB1-202ENST00000396033 HJURPQ8NCD3 748 aaPredicted RBP12.21□□□□□ -0.46
ITGB1-202ENST00000396033 BRSK1Q8TDC3 778 aa12.21□□□□□ -0.46
ITGB1-202ENST00000396033 TBATAQ96M53 351 aa12.21□□□□□ -0.46
ITGB1-202ENST00000396033 TRIB3Q96RU7 358 aa12.21□□□□□ -0.46
ITGB1-202ENST00000396033 EBF4Q9BQW3 602 aa12.21□□□□□ -0.46
ITGB1-202ENST00000396033 UNKQ9C0B0 810 aaKnown RBP12.21□□□□□ -0.46
ITGB1-202ENST00000396033 PNPOQ9NVS9 261 aa12.21□□□□□ -0.46
ITGB1-202ENST00000396033 ARMCX1Q9P291 453 aa12.21□□□□□ -0.46
ITGB1-202ENST00000396033 XPR1Q9UBH6 696 aa12.21□□□□□ -0.46
ITGB1-202ENST00000396033 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.2□□□□□ -0.46
ITGB1-202ENST00000396033 SNAP91O60641 907 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 CSPG5O95196 566 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 LRG1P02750 347 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 DNAJB1P25685 340 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 PTPRCAPQ14761 206 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 LINGO4Q6UY18 593 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 FSTL5Q8N475 847 aaPredicted RBP12.2□□□□□ -0.46
ITGB1-202ENST00000396033 FIBCD1Q8N539 461 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 OR6Y1Q8NGX8 325 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 BHMTQ93088 406 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 NXNL1Q96CM4 212 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 SLC7A6OSQ96CW6 309 aaPredicted RBP12.2□□□□□ -0.46
ITGB1-202ENST00000396033 RMDN1Q96DB5 314 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 TUBB6Q9BUF5 446 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 SUDS3Q9H7L9 328 aaPredicted RBP12.2□□□□□ -0.46
ITGB1-202ENST00000396033 IL23AQ9NPF7 189 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 OXSMQ9NWU1 459 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 MARCH4Q9P2E8 410 aaPredicted RBP12.2□□□□□ -0.46
ITGB1-202ENST00000396033 KIAA0100Q14667 2235 aaKnown RBP12.2□□□□□ -0.46
ITGB1-202ENST00000396033 TMEM114B3SHH9 223 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 HNRNPCL1O60812 293 aaKnown RBP12.2□□□□□ -0.46
ITGB1-202ENST00000396033 KLHL2O95198 593 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 ARF5P84085 180 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 TSNAXIP1Q2TAA8 658 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 FSCBQ5H9T9 825 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 OR13C4Q8NGS5 318 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 ADAMTS19Q8TE59 1207 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 MRPS31Q92665 395 aaKnown RBP12.2□□□□□ -0.46
ITGB1-202ENST00000396033 NSMCE3Q96MG7 304 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 OLFM1Q99784 485 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 STK39Q9UEW8 545 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 ASB3Q9Y575 518 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 PTPRSQ13332 1948 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 RPP40O75818 363 aaKnown RBP12.2□□□□□ -0.46
ITGB1-202ENST00000396033 TMCC1O94876 653 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 ANP32DO95626 131 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 OLFM2O95897 454 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 GOT2P00505 430 aaKnown RBP12.2□□□□□ -0.46
ITGB1-202ENST00000396033 CKMP06732 381 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 CR2P20023 1033 aa12.2□□□□□ -0.46
ITGB1-202ENST00000396033 MZF1P28698 734 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms