RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 AXLP30530 894 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 CD68P34810 354 aaPredicted RBP12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 SERPINB10P48595 397 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 CENPAP49450 140 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 VAMP7P51809 220 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 SEMA3AQ14563 771 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 C5orf22Q49AR2 442 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 GLRA4Q5JXX5 417 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 STYK1Q6J9G0 422 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 NECAB2Q7Z6G3 386 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 TXNRD3Q86VQ6 643 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 SLC9A9Q8IVB4 645 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 OR13J1Q8NGT2 312 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 MCFD2Q8NI22 146 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 DEPDC1BQ8WUY9 529 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 DPEP3Q9H4B8 488 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 PRR12Q9ULL5 1215 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 WBP11Q9Y2W2 641 aaKnown RBP12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 FIS1Q9Y3D6 152 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 TECPR2O15040 1411 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 RIMBP2O15034 1052 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 MAP3K6O95382 1288 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 IL1R1P14778 569 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 JUNBP17275 347 aaPredicted RBP12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 DSG3P32926 999 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 ZNF76P36508 570 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 YWHAZP63104 245 aaKnown RBP12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 NDUFAF5Q5TEU4 345 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 TBPL2Q6SJ96 375 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 ARSKQ6UWY0 536 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 GADL1Q6ZQY3 521 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 ANKRD13AQ8IZ07 590 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 ZBTB44Q8NCP5 570 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 OR4M2Q8NGB6 313 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 NKD2Q969F2 451 aaPredicted RBP12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 FAF2Q96CS3 445 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 RNF170Q96K19 258 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 TRAF4Q9BUZ4 470 aaPredicted RBP12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 GMEB2Q9UKD1 530 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 RNF112Q9ULX5 631 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 HES2Q9Y543 173 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 LTN1O94822 1766 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 SPATA31A6Q5VVP1 1343 aa12.6□□□□□ -0.39
SLC28A1-203ENST00000394573 C16orf96A6NNT2 1141 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 F5H423 210 aaPredicted RBP12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 PI15O43692 258 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 SERPINI2O75830 405 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 ALDOAP04075 364 aaKnown RBP12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 SPATA31C1P0DKV0 1188 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 CYP2C8P10632 490 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 ADRA2BP18089 450 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 AGXTP21549 392 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 RPS9P46781 194 aaKnown RBP12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 MGAT3Q09327 533 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 DPYSL3Q14195 570 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 CA9Q16790 459 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 GPATCH4Q5T3I0 446 aaKnown RBP12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 STRADAQ7RTN6 431 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 TBC1D21Q8IYX1 336 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 RCOR2Q8IZ40 523 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 CLYBLQ8N0X4 340 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 SLC35B2Q8TB61 432 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 SHC3Q92529 594 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 TMEM80Q96HE8 168 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 CPB2Q96IY4 423 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 UHRF1Q96T88 793 aaPredicted RBP12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 BDH2Q9BUT1 245 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 CDADC1Q9BWV3 514 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 UPF3AQ9H1J1 476 aaKnown RBP12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 IFT22Q9H7X7 185 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 TOPORSQ9NS56 1045 aaPredicted RBP12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 TRMT13Q9NUP7 481 aaKnown RBP12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 SYBUQ9NX95 663 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 NUFIP1Q9UHK0 495 aaKnown RBP12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 ENOPH1Q9UHY7 261 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 TRMT112Q9UI30 125 aaKnown RBP12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 SNX8Q9Y5X2 465 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 COPG1Q9Y678 874 aaKnown RBP12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 CDY2AQ9Y6F7 541 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 CDY1Q9Y6F8 540 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 USP17L5A8MUK1 530 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 GPR25O00155 361 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 TOR1AO14656 332 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 PTTG1O95997 202 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 PRKCGP05129 697 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 CDH5P33151 784 aaPredicted RBP12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 ARCN1P48444 511 aaKnown RBP12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 UBE3AQ05086 875 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 PTP4A2Q12974 167 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 AP3B2Q13367 1082 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 MAMLD1Q13495 774 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 MEP1AQ16819 746 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 TYSND1Q2T9J0 566 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 DRICH1Q6PGQ1 229 aaPredicted RBP12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 TMEM65Q6PI78 240 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 KIAA1324Q6UXG2 1013 aaKnown RBP12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 BNIPLQ7Z465 357 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 LACC1Q8IV20 430 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 COLGALT2Q8IYK4 626 aa12.59□□□□□ -0.39
SLC28A1-203ENST00000394573 UBQLNLQ8IYU4 475 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms