RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 NOD2Q9HC29 1040 aa23.31■■□□□ 1.32
HMGA2-202ENST00000393577 NT5MQ9NPB1 228 aa23.31■■□□□ 1.32
HMGA2-202ENST00000393577 MBNL1Q9NR56 388 aaKnown RBP23.31■■□□□ 1.32
HMGA2-202ENST00000393577 DNAJC28Q9NX36 388 aa23.31■■□□□ 1.32
HMGA2-202ENST00000393577 PCDHGC4Q9Y5F7 938 aa23.31■■□□□ 1.32
HMGA2-202ENST00000393577 SPTY2D1-AS1A0A0U1RR47 76 aa23.3■■□□□ 1.32
HMGA2-202ENST00000393577 COMTP21964 271 aa23.3■■□□□ 1.32
HMGA2-202ENST00000393577 DGKAP23743 735 aa23.3■■□□□ 1.32
HMGA2-202ENST00000393577 CYLC1P35663 651 aaPredicted RBP23.3■■□□□ 1.32
HMGA2-202ENST00000393577 NOP2P46087 812 aaKnown RBP23.3■■□□□ 1.32
HMGA2-202ENST00000393577 LIG3P49916 1009 aa23.3■■□□□ 1.32
HMGA2-202ENST00000393577 POLR2LP62875 67 aaKnown RBP23.3■■□□□ 1.32
HMGA2-202ENST00000393577 IRF4Q15306 451 aa23.3■■□□□ 1.32
HMGA2-202ENST00000393577 SPA17Q15506 151 aa23.3■■□□□ 1.32
HMGA2-202ENST00000393577 CCDC157Q569K6 752 aa23.3■■□□□ 1.32
HMGA2-202ENST00000393577 PARGQ86W56 976 aa23.3■■□□□ 1.32
HMGA2-202ENST00000393577 TEX26Q8N6G2 289 aa23.3■■□□□ 1.32
HMGA2-202ENST00000393577 PDCD6IPQ8WUM4 868 aaKnown RBP23.3■■□□□ 1.32
HMGA2-202ENST00000393577 LRRN4Q8WUT4 740 aa23.3■■□□□ 1.32
HMGA2-202ENST00000393577 IFT43Q96FT9 208 aa23.3■■□□□ 1.32
HMGA2-202ENST00000393577 UCKL1Q9NWZ5 548 aa23.3■■□□□ 1.32
HMGA2-202ENST00000393577 TFR2Q9UP52 801 aa23.3■■□□□ 1.32
HMGA2-202ENST00000393577 NEUROG3Q9Y4Z2 214 aa23.3■■□□□ 1.32
HMGA2-202ENST00000393577 PCDHA13Q9Y5I0 950 aa23.3■■□□□ 1.32
HMGA2-202ENST00000393577 SOWAHDA6NJG2 315 aa23.29■■□□□ 1.32
HMGA2-202ENST00000393577 C3orf70A6NLC5 250 aaPredicted RBP23.29■■□□□ 1.32
HMGA2-202ENST00000393577 ENC1O14682 589 aa23.29■■□□□ 1.32
HMGA2-202ENST00000393577 HTRA2O43464 458 aaPredicted RBP23.29■■□□□ 1.32
HMGA2-202ENST00000393577 SPOPO43791 374 aa23.29■■□□□ 1.32
HMGA2-202ENST00000393577 LZTS3O60299 673 aaPredicted RBP23.29■■□□□ 1.32
HMGA2-202ENST00000393577 SOCS5O75159 536 aa23.29■■□□□ 1.32
HMGA2-202ENST00000393577 PIAS2O75928 621 aa23.29■■□□□ 1.32
HMGA2-202ENST00000393577 SLC10A2Q12908 348 aaPredicted RBP23.29■■□□□ 1.32
HMGA2-202ENST00000393577 TRAF2Q12933 501 aa23.29■■□□□ 1.32
HMGA2-202ENST00000393577 RALGDSQ12967 914 aa23.29■■□□□ 1.32
HMGA2-202ENST00000393577 LRRC14Q15048 493 aa23.29■■□□□ 1.32
HMGA2-202ENST00000393577 LRRC38Q5VT99 294 aa23.29■■□□□ 1.32
HMGA2-202ENST00000393577 RHOT1Q8IXI2 618 aa23.29■■□□□ 1.32
HMGA2-202ENST00000393577 SLC25A45Q8N413 288 aa23.29■■□□□ 1.32
HMGA2-202ENST00000393577 MAML1Q92585 1016 aa23.29■■□□□ 1.32
HMGA2-202ENST00000393577 CEP295Q9C0D2 2601 aa23.29■■□□□ 1.32
HMGA2-202ENST00000393577 DTLQ9NZJ0 730 aa23.29■■□□□ 1.32
HMGA2-202ENST00000393577 ZNF487B1APH4 448 aa23.28■■□□□ 1.32
HMGA2-202ENST00000393577 MATN3O15232 486 aa23.28■■□□□ 1.32
HMGA2-202ENST00000393577 DKK1O94907 266 aa23.28■■□□□ 1.32
HMGA2-202ENST00000393577 CPP00450 1065 aa23.28■■□□□ 1.32
HMGA2-202ENST00000393577 MX2P20592 715 aa23.28■■□□□ 1.32
HMGA2-202ENST00000393577 CCNCP24863 283 aa23.28■■□□□ 1.32
HMGA2-202ENST00000393577 THOP1P52888 689 aa23.28■■□□□ 1.32
HMGA2-202ENST00000393577 ITKQ08881 620 aa23.28■■□□□ 1.32
HMGA2-202ENST00000393577 DNAJC3Q13217 504 aa23.28■■□□□ 1.32
HMGA2-202ENST00000393577 WSCD2Q2TBF2 565 aa23.28■■□□□ 1.32
HMGA2-202ENST00000393577 ODF2Q5BJF6 829 aa23.28■■□□□ 1.32
HMGA2-202ENST00000393577 RALGPS1Q5JS13 557 aa23.28■■□□□ 1.32
HMGA2-202ENST00000393577 DPPA4Q7L190 304 aa23.28■■□□□ 1.32
HMGA2-202ENST00000393577 PLD5Q8N7P1 536 aa23.28■■□□□ 1.32
HMGA2-202ENST00000393577 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.28■■□□□ 1.32
HMGA2-202ENST00000393577 RNF25Q96BH1 459 aaPredicted RBP23.28■■□□□ 1.32
HMGA2-202ENST00000393577 TSGA13Q96PP4 275 aa23.28■■□□□ 1.32
HMGA2-202ENST00000393577 PTPRBP23467 1997 aa23.28■■□□□ 1.32
HMGA2-202ENST00000393577 A0A1W2PQ67 120 aa23.27■■□□□ 1.32
HMGA2-202ENST00000393577 A8MX80 341 aa23.27■■□□□ 1.32
HMGA2-202ENST00000393577 FFAR2O15552 330 aa23.27■■□□□ 1.32
HMGA2-202ENST00000393577 ELFN1P0C7U0 828 aa23.27■■□□□ 1.32
HMGA2-202ENST00000393577 FECHP22830 423 aa23.27■■□□□ 1.32
HMGA2-202ENST00000393577 HADHBP55084 474 aaKnown RBP23.27■■□□□ 1.32
HMGA2-202ENST00000393577 LIPIQ6XZB0 460 aa23.27■■□□□ 1.32
HMGA2-202ENST00000393577 VSIG1Q86XK7 387 aa23.27■■□□□ 1.32
HMGA2-202ENST00000393577 CCNYQ8ND76 341 aa23.27■■□□□ 1.32
HMGA2-202ENST00000393577 HDAC11Q96DB2 347 aa23.27■■□□□ 1.32
HMGA2-202ENST00000393577 ZNF830Q96NB3 372 aaPredicted RBP23.27■■□□□ 1.32
HMGA2-202ENST00000393577 SEMA3CQ99985 751 aa23.27■■□□□ 1.32
HMGA2-202ENST00000393577 MAK16Q9BXY0 300 aaKnown RBP23.27■■□□□ 1.32
HMGA2-202ENST00000393577 POLR1EQ9GZS1 481 aaKnown RBP23.27■■□□□ 1.32
HMGA2-202ENST00000393577 GOLPH3Q9H4A6 298 aa23.27■■□□□ 1.32
HMGA2-202ENST00000393577 LUC7LQ9NQ29 371 aaKnown RBP23.27■■□□□ 1.32
HMGA2-202ENST00000393577 RBM22Q9NW64 420 aaKnown RBP eCLIP23.27■■□□□ 1.32
HMGA2-202ENST00000393577 DDX56Q9NY93 547 aaKnown RBP23.27■■□□□ 1.32
HMGA2-202ENST00000393577 B4GALT6Q9UBX8 382 aa23.27■■□□□ 1.32
HMGA2-202ENST00000393577 MSRB2Q9Y3D2 182 aa23.27■■□□□ 1.32
HMGA2-202ENST00000393577 TTLL3Q9Y4R7 772 aa23.27■■□□□ 1.32
HMGA2-202ENST00000393577 CFAP69A5D8W1 941 aa23.26■■□□□ 1.31
HMGA2-202ENST00000393577 TRIM38O00635 465 aa23.26■■□□□ 1.31
HMGA2-202ENST00000393577 APOL1O14791 398 aa23.26■■□□□ 1.31
HMGA2-202ENST00000393577 NEBLO76041 1014 aa23.26■■□□□ 1.31
HMGA2-202ENST00000393577 CSF2P04141 144 aa23.26■■□□□ 1.31
HMGA2-202ENST00000393577 PCCBP05166 539 aa23.26■■□□□ 1.31
HMGA2-202ENST00000393577 NME1P15531 152 aaKnown RBP23.26■■□□□ 1.31
HMGA2-202ENST00000393577 HNRNPKP61978 463 aaKnown RBP eCLIP23.26■■□□□ 1.31
HMGA2-202ENST00000393577 YPEL5P62699 121 aa23.26■■□□□ 1.31
HMGA2-202ENST00000393577 EIF2B5Q13144 721 aaKnown RBP23.26■■□□□ 1.31
HMGA2-202ENST00000393577 PTK2BQ14289 1009 aa23.26■■□□□ 1.31
HMGA2-202ENST00000393577 SLC9A4Q6AI14 798 aa23.26■■□□□ 1.31
HMGA2-202ENST00000393577 RFX6Q8HWS3 928 aa23.26■■□□□ 1.31
HMGA2-202ENST00000393577 TMTC1Q8IUR5 882 aa23.26■■□□□ 1.31
HMGA2-202ENST00000393577 CCDC13Q8IYE1 715 aa23.26■■□□□ 1.31
HMGA2-202ENST00000393577 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.26■■□□□ 1.31
HMGA2-202ENST00000393577 SPOCK2Q92563 424 aa23.26■■□□□ 1.31
HMGA2-202ENST00000393577 FATE1Q969F0 183 aa23.26■■□□□ 1.31
HMGA2-202ENST00000393577 KLF15Q9UIH9 416 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms