RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PSMD5Q16401 504 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 INTS11Q5TA45 600 aaKnown RBP19.81■□□□□ 0.76
SHANK1-203ENST00000391813 IL27RAQ6UWB1 636 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 DEFB128Q7Z7B8 93 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 HIPK1Q86Z02 1210 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 WDR55Q9H6Y2 383 aaPredicted RBP19.81■□□□□ 0.76
SHANK1-203ENST00000391813 NKX1-2Q9UD57 310 aaPredicted RBP19.81■□□□□ 0.76
SHANK1-203ENST00000391813 STOML2Q9UJZ1 356 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 IKZF3Q9UKT9 509 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 ERGIC3Q9Y282 383 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 UBIAD1Q9Y5Z9 338 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 LTN1O94822 1766 aa19.81■□□□□ 0.76
SHANK1-203ENST00000391813 AHDC1Q5TGY3 1603 aaPredicted RBP19.81■□□□□ 0.76
SHANK1-203ENST00000391813 FZD9O00144 591 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 CYB561D2O14569 222 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 SLC22A2O15244 555 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 MMP8P22894 467 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 RPS7P62081 194 aaKnown RBP19.8■□□□□ 0.76
SHANK1-203ENST00000391813 ZNF549Q6P9A3 640 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 TMEM161BQ8NDZ6 487 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 YBX3P16989 372 aaKnown RBP eCLIP19.8■□□□□ 0.76
SHANK1-203ENST00000391813 TFEBP19484 476 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 MSX2P35548 267 aaPredicted RBP19.8■□□□□ 0.76
SHANK1-203ENST00000391813 HALP42357 657 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 CDH8P55286 799 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 SOX10P56693 466 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 PFKFB4Q16877 469 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 CCNYL2Q5T2Q4 361 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 KRT78Q8N1N4 520 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 NKAPQ8N5F7 415 aaKnown RBP19.8■□□□□ 0.76
SHANK1-203ENST00000391813 AP3S1Q92572 193 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 TBCCD1Q9NVR7 557 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 ARHGAP28Q9P2N2 729 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 EGFL7Q9UHF1 273 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 MAPRE3Q9UPY8 281 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 STXBP5LQ9Y2K9 1186 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 SNX8Q9Y5X2 465 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 BTN3A1O00481 513 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 USP2O75604 605 aaPredicted RBP19.8■□□□□ 0.76
SHANK1-203ENST00000391813 FARP2O94887 1054 aaPredicted RBP19.8■□□□□ 0.76
SHANK1-203ENST00000391813 ARSHQ5FYA8 562 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 SLC41A1Q8IVJ1 513 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 PPP3R2Q96LZ3 170 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 PTPRHQ9HD43 1115 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 ABI2Q9NYB9 513 aaPredicted RBP19.8■□□□□ 0.76
SHANK1-203ENST00000391813 F5H5T6 163 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 C2P06681 752 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 C15orf59Q2T9L4 293 aaPredicted RBP19.8■□□□□ 0.76
SHANK1-203ENST00000391813 GPSM1Q86YR5 675 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 HTRA1Q92743 480 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 TAMM41Q96BW9 452 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 RHOJQ9H4E5 214 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 TMEM134Q9H6X4 195 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 SNCAIPQ9Y6H5 919 aa19.8■□□□□ 0.76
SHANK1-203ENST00000391813 FAM208AQ9UK61 1670 aaKnown RBP19.79■□□□□ 0.76
SHANK1-203ENST00000391813 KLRG2A4D1S0 409 aaPredicted RBP19.79■□□□□ 0.76
SHANK1-203ENST00000391813 SPATA31C1P0DKV0 1188 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 GPC1P35052 558 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 RPS9P46781 194 aaKnown RBP19.79■□□□□ 0.76
SHANK1-203ENST00000391813 CTXN3Q4LDR2 81 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 FAM43BQ6ZT52 329 aaPredicted RBP19.79■□□□□ 0.76
SHANK1-203ENST00000391813 ASZ1Q8WWH4 475 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 SYT15Q9BQS2 421 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 CLN6Q9NWW5 311 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 TCHHQ07283 1943 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 LOC110117498-PIK3R3F6TDL0 507 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 BTG3Q14201 252 aaPredicted RBP19.79■□□□□ 0.76
SHANK1-203ENST00000391813 PLET1Q6UQ28 207 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 LBX2Q6XYB7 198 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 RAB43Q86YS6 212 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 BCLAF3A2AJT9 711 aaKnown RBP19.79■□□□□ 0.76
SHANK1-203ENST00000391813 BTN3A3O00478 584 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 AZIN1O14977 448 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 PAICSP22234 425 aaKnown RBP19.79■□□□□ 0.76
SHANK1-203ENST00000391813 ADIGQ0VDE8 80 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 IKBKEQ14164 716 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 CBR4Q8N4T8 237 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 DNAJC1Q96KC8 554 aaKnown RBP19.79■□□□□ 0.76
SHANK1-203ENST00000391813 KREMEN1Q96MU8 473 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 TRMT13Q9NUP7 481 aaKnown RBP19.79■□□□□ 0.76
SHANK1-203ENST00000391813 MRPL39Q9NYK5 338 aaKnown RBP19.79■□□□□ 0.76
SHANK1-203ENST00000391813 CCDC59Q9P031 241 aaKnown RBP19.79■□□□□ 0.76
SHANK1-203ENST00000391813 PRKAR2AP13861 404 aaKnown RBP19.79■□□□□ 0.76
SHANK1-203ENST00000391813 NOS2P35228 1153 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 OXCT1P55809 520 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 NADK2Q4G0N4 442 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 BICRALQ6AI39 1079 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 OFCC1Q8IZS5 231 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 CACTIN-AS1Q8N1I8 211 aa19.79■□□□□ 0.76
SHANK1-203ENST00000391813 CSDE1O75534 798 aaKnown RBP19.78■□□□□ 0.76
SHANK1-203ENST00000391813 ERBB2P04626 1255 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 ZNF7P17097 686 aaPredicted RBP19.78■□□□□ 0.76
SHANK1-203ENST00000391813 ADAM17P78536 824 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 PLPPR4Q7Z2D5 763 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 CD320Q9NPF0 282 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 SEMA4BQ9NPR2 832 aaPredicted RBP19.78■□□□□ 0.76
SHANK1-203ENST00000391813 KLHL28Q9NXS3 571 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 NID2Q14112 1375 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 BTBD19C9JJ37 291 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 G3V2T6 193 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms