RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
SNORA40.3-201ENST00000390964 TMEM81Q6P7N7 255 aa3.72□□□□□ -1.81
SNORA40.3-201ENST00000390964 GPAT4Q86UL3 456 aa3.72□□□□□ -1.81
SNORA40.3-201ENST00000390964 PGBD5Q8N414 524 aa3.72□□□□□ -1.81
SNORA40.3-201ENST00000390964 LILRB1Q8NHL6 650 aaPredicted RBP3.72□□□□□ -1.81
SNORA40.3-201ENST00000390964 ADGRG7Q96K78 797 aa3.72□□□□□ -1.81
SNORA40.3-201ENST00000390964 MXRA8Q9BRK3 442 aa3.72□□□□□ -1.81
SNORA40.3-201ENST00000390964 GAREM1Q9H706 876 aa3.72□□□□□ -1.81
SNORA40.3-201ENST00000390964 RRN3Q9NYV6 651 aa3.72□□□□□ -1.81
SNORA40.3-201ENST00000390964 ZNF112Q9UJU3 913 aa3.72□□□□□ -1.81
SNORA40.3-201ENST00000390964 PLSCR5A0PG75 271 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 NCAM2O15394 837 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 POLBP06746 335 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 GALTP07902 379 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 SNRNP70P08621 437 aaKnown RBP3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 ERVFC1-1P60608 527 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 DLG1Q12959 904 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 SNTA1Q13424 505 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 DHX34Q14147 1143 aaKnown RBP3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 NEDD9Q14511 834 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 VEPH1Q14D04 833 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 SF3B4Q15427 424 aaKnown RBP eCLIP3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 GPR68Q15743 365 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 CALCRLQ16602 461 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 BAK1Q16611 211 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 HIST2H2ACQ16777 129 aaPredicted RBP3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 TMEM95Q3KNT9 176 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 CPLX2Q6PUV4 134 aaKnown RBP3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 SLC22A25Q6T423 547 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 RRM2BQ7LG56 351 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 ZC3HC1Q86WB0 502 aaKnown RBP3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 SMC5Q8IY18 1101 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 SMAP1Q8IYB5 467 aaPredicted RBP3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 SCCPDHQ8NBX0 429 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 ZBTB10Q96DT7 871 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 MTBPQ96DY7 904 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 SCMH1Q96GD3 660 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 IGSF21Q96ID5 467 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 LMLNQ96KR4 655 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 ZNF385AQ96PM9 386 aaKnown RBP3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 SIN3AQ96ST3 1273 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 PSMD1Q99460 953 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 GGA3Q9NZ52 723 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 HSPB7Q9UBY9 170 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 SLCO3A1Q9UIG8 710 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 LRRFIP2Q9Y608 721 aaKnown RBP3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 NOTCH4Q99466 2003 aa3.71□□□□□ -1.82
SNORA40.3-201ENST00000390964 ATXN2Q99700 1313 aaKnown RBP3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 MAGEA13PA6NCF6 341 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 TACC1O75410 805 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 MT-CYBP00156 380 aaPredicted RBP3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 MMP2P08253 660 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 HNRNPA1P09651 372 aaKnown RBP eCLIP3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 IRF1P10914 325 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 ETFAP13804 333 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 COX7A2P14406 83 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 AGAP20933 346 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 PIGAP37287 484 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 MAPK9P45984 424 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 UFM1P61960 85 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 RPP30P78346 268 aaKnown RBP3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 POU5F1BQ06416 359 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 DDR1Q08345 913 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 FOXD4Q12950 439 aaPredicted RBP3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 TDGQ13569 410 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 SETMARQ53H47 684 aaPredicted RBP3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 TXNDC8Q6A555 127 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 WBP2NLQ6ICG8 309 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 RHBDF2Q6PJF5 856 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 AGBL3Q8NEM8 1001 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 ERGIC1Q969X5 290 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 FBXL8Q96CD0 374 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 HVCN1Q96D96 273 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 BICD1Q96G01 975 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 APOPT1Q96IL0 206 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 OR1F2PQ96R84 312 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 TTYH1Q9H313 450 aaPredicted RBP3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 C20orf141Q9NUB4 165 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 CISD1Q9NZ45 108 aaKnown RBP3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 SLC13A4Q9UKG4 626 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 GJD2Q9UKL4 321 aa3.7□□□□□ -1.82
SNORA40.3-201ENST00000390964 RRN3P2A6NIE6 340 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 NPIPB11E5RHQ5 1161 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 TNPO2O14787 897 aaKnown RBP3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 TSPAN4O14817 238 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 ZIC3O60481 467 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 LDB3O75112 727 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 KRT36O76013 467 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 EDN2P20800 178 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 SSTR2P30874 369 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 HNRNPH1P31943 449 aaKnown RBP3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 ARL1P40616 181 aaPredicted RBP3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 GABRB2P47870 512 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 EFNA5P52803 228 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 RAD23BP54727 409 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 GRIK3Q13003 919 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 TCTN1Q2MV58 587 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 PRICKLE4Q2TBC4 344 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 AMZ1Q400G9 498 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 FAM122CQ6P4D5 195 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms