RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 TRAF7Q6Q0C0 670 aa15.05■□□□□ -0
SCFD2-201ENST00000388940 CHSY3Q70JA7 882 aa15.05■□□□□ -0
SCFD2-201ENST00000388940 SLC22A9Q8IVM8 553 aa15.05■□□□□ -0
SCFD2-201ENST00000388940 PELI3Q8N2H9 469 aa15.05■□□□□ -0
SCFD2-201ENST00000388940 PEX13Q92968 403 aa15.05■□□□□ -0
SCFD2-201ENST00000388940 PPP1R36Q96LQ0 422 aa15.05■□□□□ -0
SCFD2-201ENST00000388940 CATSPER2Q96P56 530 aa15.05■□□□□ -0
SCFD2-201ENST00000388940 KLHL4Q9C0H6 718 aa15.05■□□□□ -0
SCFD2-201ENST00000388940 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.05■□□□□ -0
SCFD2-201ENST00000388940 EFCAB1Q9HAE3 211 aa15.05■□□□□ -0
SCFD2-201ENST00000388940 BCAP29Q9UHQ4 241 aa15.05■□□□□ -0
SCFD2-201ENST00000388940 VWA7Q9Y334 891 aa15.05■□□□□ -0
SCFD2-201ENST00000388940 SKAP2O75563 359 aaPredicted RBP15.04■□□□□ -0
SCFD2-201ENST00000388940 RTN3O95197 1032 aaPredicted RBP15.04■□□□□ -0
SCFD2-201ENST00000388940 CKBP12277 381 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 YWHAQP27348 245 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 GRK4P32298 578 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 MAXP61244 160 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 ACVR1Q04771 509 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 LAMB3Q13751 1172 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 PDCD2Q16342 344 aaPredicted RBP15.04■□□□□ -0
SCFD2-201ENST00000388940 ZNF423Q2M1K9 1284 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 PARP15Q460N3 678 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 PIGGQ5H8A4 983 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 TMEM198Q66K66 360 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 NXNQ6DKJ4 435 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 BNC2Q6ZN30 1099 aaPredicted RBP15.04■□□□□ -0
SCFD2-201ENST00000388940 AFAP1L2Q8N4X5 818 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 LINC01599Q8WXQ3 324 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 IGSF8Q969P0 613 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 PSMG2Q969U7 264 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 PABPC5Q96DU9 382 aaKnown RBP15.04■□□□□ -0
SCFD2-201ENST00000388940 KLHL5Q96PQ7 755 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 NDNQ99608 321 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 PPP1R12CQ9BZL4 782 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.04■□□□□ -0
SCFD2-201ENST00000388940 COMMD8Q9NX08 183 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 COPG1Q9Y678 874 aaKnown RBP15.04■□□□□ -0
SCFD2-201ENST00000388940 A8MT66 165 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 S1PR4O95977 384 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 ATXN1LP0C7T5 689 aaKnown RBP15.04■□□□□ -0
SCFD2-201ENST00000388940 CCDC166P0CW27 439 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 RAG1P15918 1043 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 PBX3P40426 434 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 YBEYP58557 167 aaPredicted RBP15.04■□□□□ -0
SCFD2-201ENST00000388940 PRKCZQ05513 592 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 SULT2A1Q06520 285 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 MTA1Q13330 715 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 SERINC3Q13530 473 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 SIRPB2Q5JXA9 342 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 ZNF280DQ6N043 979 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 EFCAB3Q8N7B9 438 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 RCN3Q96D15 328 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 SGF29Q96ES7 293 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 IFT43Q96FT9 208 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 MEAF6Q9HAF1 191 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 PDP2Q9P2J9 529 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 PSMD13Q9UNM6 376 aa15.04■□□□□ -0
SCFD2-201ENST00000388940 OR6C75A6NL08 312 aa15.03■□□□□ -0
SCFD2-201ENST00000388940 RING1Q06587 406 aa15.03■□□□□ -0
SCFD2-201ENST00000388940 POLD3Q15054 466 aaPredicted RBP15.03■□□□□ -0
SCFD2-201ENST00000388940 TMEM126BQ8IUX1 230 aa15.03■□□□□ -0
SCFD2-201ENST00000388940 PGBD5Q8N414 524 aa15.03■□□□□ -0
SCFD2-201ENST00000388940 GDPD5Q8WTR4 605 aa15.03■□□□□ -0
SCFD2-201ENST00000388940 FBXO32Q969P5 355 aa15.03■□□□□ -0
SCFD2-201ENST00000388940 CDRT15Q96T59 188 aa15.03■□□□□ -0
SCFD2-201ENST00000388940 UNKQ9C0B0 810 aaKnown RBP15.03■□□□□ -0
SCFD2-201ENST00000388940 TLR8Q9NR97 1041 aaKnown RBP15.03■□□□□ -0
SCFD2-201ENST00000388940 C6orf203Q9P0P8 240 aaPredicted RBP15.03■□□□□ -0
SCFD2-201ENST00000388940 G3BP2Q9UN86 482 aaKnown RBP15.03■□□□□ -0
SCFD2-201ENST00000388940 CHD5Q8TDI0 1954 aa15.03■□□□□ -0
SCFD2-201ENST00000388940 TCAF2A6NFQ2 919 aa15.02■□□□□ -0
SCFD2-201ENST00000388940 NEMP2A6NFY4 417 aa15.02■□□□□ -0
SCFD2-201ENST00000388940 TMEM233B4DJY2 109 aa15.02■□□□□ -0
SCFD2-201ENST00000388940 LDB2O43679 373 aa15.02■□□□□ -0
SCFD2-201ENST00000388940 EPOP01588 193 aa15.02■□□□□ -0
SCFD2-201ENST00000388940 COL6A1P12109 1028 aa15.02■□□□□ -0
SCFD2-201ENST00000388940 HOXB8P17481 243 aaPredicted RBP15.02■□□□□ -0
SCFD2-201ENST00000388940 MAPKAPK2P49137 400 aa15.02■□□□□ -0
SCFD2-201ENST00000388940 CCNHP51946 323 aaPredicted RBP15.02■□□□□ -0
SCFD2-201ENST00000388940 INHBCP55103 352 aa15.02■□□□□ -0
SCFD2-201ENST00000388940 CTXN3Q4LDR2 81 aa15.02■□□□□ -0
SCFD2-201ENST00000388940 RAP1GAP2Q684P5 730 aa15.02■□□□□ -0
SCFD2-201ENST00000388940 GPR150Q8NGU9 434 aa15.02■□□□□ -0
SCFD2-201ENST00000388940 SPPL2BQ8TCT7 592 aa15.02■□□□□ -0
SCFD2-201ENST00000388940 HDAC10Q969S8 669 aa15.02■□□□□ -0
SCFD2-201ENST00000388940 FAM193BQ96PV7 902 aaPredicted RBP15.02■□□□□ -0
SCFD2-201ENST00000388940 TRMOQ9BU70 441 aa15.02■□□□□ -0
SCFD2-201ENST00000388940 UTP6Q9NYH9 597 aaKnown RBP15.02■□□□□ -0
SCFD2-201ENST00000388940 MARCH2Q9P0N8 246 aa15.02■□□□□ -0
SCFD2-201ENST00000388940 UXTQ9UBK9 157 aaPredicted RBP15.02■□□□□ -0
SCFD2-201ENST00000388940 RIMKLBQ9ULI2 386 aa15.02■□□□□ -0
SCFD2-201ENST00000388940 ASB3Q9Y575 518 aa15.02■□□□□ -0
SCFD2-201ENST00000388940 THSD7BQ9C0I4 1608 aa15.02■□□□□ -0
SCFD2-201ENST00000388940 RAMP2O60895 175 aa15.02□□□□□ -0.01
SCFD2-201ENST00000388940 LYNP07948 512 aa15.02□□□□□ -0.01
SCFD2-201ENST00000388940 PIM1P11309 404 aaPredicted RBP15.02□□□□□ -0.01
SCFD2-201ENST00000388940 PRKAR2AP13861 404 aaKnown RBP15.02□□□□□ -0.01
SCFD2-201ENST00000388940 HNRNPLP14866 589 aaKnown RBP eCLIP15.02□□□□□ -0.011e-6■□□□□ 10.7
SCFD2-201ENST00000388940 IMPDH1P20839 514 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms