RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 A0A0A0MRY4 1105 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 CCL15-CCL14A0A0B4J2E2 113 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 A6NL46 340 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 S100BP04271 92 aaPredicted RBP13.95□□□□□ -0.18
SDC1-202ENST00000381150 IL10P22301 178 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 CES1P23141 567 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 YWHAQP27348 245 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 SLC12A2P55011 1212 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 TXNL4AP83876 142 aaKnown RBP13.95□□□□□ -0.18
SDC1-202ENST00000381150 SLC6A3Q01959 620 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 NIPAL4Q0D2K0 466 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 MERTKQ12866 999 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 STX5Q13190 355 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 CCL15Q16663 113 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 SOWAHAQ2M3V2 549 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 ZNF362Q5T0B9 420 aaPredicted RBP13.95□□□□□ -0.18
SDC1-202ENST00000381150 GRTP1Q5TC63 336 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 LIPMQ5VYY2 423 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 REP15Q6BDI9 236 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 CLEC6AQ6EIG7 209 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 SLC27A1Q6PCB7 646 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 SLC2A7Q6PXP3 512 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 PIGZQ86VD9 579 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 KCNMB4Q86W47 210 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 FSTL5Q8N475 847 aaPredicted RBP13.95□□□□□ -0.18
SDC1-202ENST00000381150 ARNTL2Q8WYA1 636 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 SPATA13Q96N96 652 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 TCF12Q99081 682 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 RBBP8Q99708 897 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 DRC3Q9H069 523 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 CCDC68Q9H2F9 335 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 SLC27A5Q9Y2P5 690 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 HCRTO43612 131 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 MFSD11O43934 449 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 TADA2AO75478 443 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 ESRRBO95718 433 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 MTHFD1P11586 935 aaKnown RBP13.94□□□□□ -0.18
SDC1-202ENST00000381150 NCK1P16333 377 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 IQSEC1Q6DN90 963 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 OR6J1Q8NGC5 347 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 PPP1R13LQ8WUF5 828 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 NXNL1Q96CM4 212 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 RTP4Q96DX8 246 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 LRCH3Q96II8 777 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 PTPN18Q99952 460 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 MUC3BQ9H195 1237 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 PRDM12Q9H4Q4 367 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 OXSMQ9NWU1 459 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 PKD2L2Q9NZM6 624 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 HESX1Q9UBX0 185 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 MBLAC1A4D2B0 266 aaPredicted RBP13.94□□□□□ -0.18
SDC1-202ENST00000381150 GLTPD2A6NH11 291 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 PTGES3LE9PB15 166 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 PCNAP12004 261 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 CHRM3P20309 590 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 ELK4P28324 431 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 RPL34P49207 117 aaKnown RBP13.94□□□□□ -0.18
SDC1-202ENST00000381150 ADAM17P78536 824 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 CYP51A1Q16850 503 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 IMPG1Q17R60 797 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 DPP9Q86TI2 863 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 SAPCD2Q86UD0 394 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 CAMK1DQ8IU85 385 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 CSPG4P5Q96PW8 444 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 NPLQ9BXD5 320 aaPredicted RBP13.94□□□□□ -0.18
SDC1-202ENST00000381150 DPEP3Q9H4B8 488 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 PCDHGA7Q9Y5G6 932 aa13.94□□□□□ -0.18
SDC1-202ENST00000381150 CNOT3O75175 753 aaKnown RBP13.93□□□□□ -0.18
SDC1-202ENST00000381150 ZNF12P17014 697 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 CSHL1Q14406 222 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 RNF19BQ6ZMZ0 732 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 LRRC52Q8N7C0 313 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 SLCO4A1Q96BD0 722 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 POMKQ9H5K3 350 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 DOCK3Q8IZD9 2030 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 GCATO75600 419 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 DDHD2O94830 711 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 TPSB2P20231 275 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 STX1BP61266 288 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 OCA2Q04671 838 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 TPSAB1Q15661 275 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 INSCQ1MX18 579 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 C9orf57Q5W0N0 161 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 ARHGAP17Q68EM7 881 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 DHRSXQ8N5I4 330 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 Q8N9G6 341 aaPredicted RBP13.93□□□□□ -0.18
SDC1-202ENST00000381150 OR6B3Q8NGW1 331 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 CAPSLQ8WWF8 208 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 LRRC40Q9H9A6 602 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 DUS2Q9NX74 493 aaKnown RBP13.93□□□□□ -0.18
SDC1-202ENST00000381150 CACNA2D2Q9NY47 1150 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 KRBA1A5PL33 1030 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 RRN3P2A6NIE6 340 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 PIRO00625 290 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 ATP6V1B2P21281 511 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 ARL1P40616 181 aaPredicted RBP13.93□□□□□ -0.18
SDC1-202ENST00000381150 LIMK2P53671 638 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 TPTEP56180 551 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 LIMS2Q7Z4I7 341 aa13.93□□□□□ -0.18
SDC1-202ENST00000381150 DNAJB14Q8TBM8 379 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms