RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 TIMM44O43615 452 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 ACSL4O60488 711 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 SUPT3HO75486 399 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 LYPLA1O75608 230 aaPredicted RBP14.37□□□□□ -0.11
CLCN4-201ENST00000380829 IL1BP01584 269 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 AHSGP02765 367 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 ARCN1P48444 511 aaKnown RBP14.37□□□□□ -0.11
CLCN4-201ENST00000380829 HARS2P49590 506 aaKnown RBP14.37□□□□□ -0.11
CLCN4-201ENST00000380829 RPS24P62847 133 aaKnown RBP14.37□□□□□ -0.11
CLCN4-201ENST00000380829 HECTD3Q5T447 861 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 STXBP5Q5T5C0 1151 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 MBLAC2Q68D91 279 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 ACAD11Q709F0 780 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 ZC3HC1Q86WB0 502 aaKnown RBP14.37□□□□□ -0.11
CLCN4-201ENST00000380829 C10orf107Q8IVU9 208 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 OR52K2Q8NGK3 314 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 TOP1MTQ969P6 601 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 PPP2R3CQ969Q6 453 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 SKA1Q96BD8 255 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 TMEM169Q96HH4 297 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 ZFP37Q9Y6Q3 630 aaPredicted RBP14.37□□□□□ -0.11
CLCN4-201ENST00000380829 MUSKO15146 869 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 SNNO75324 88 aaPredicted RBP14.36□□□□□ -0.11
CLCN4-201ENST00000380829 C2P06681 752 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 IRF1P10914 325 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 FGF3P11487 239 aaPredicted RBP14.36□□□□□ -0.11
CLCN4-201ENST00000380829 ITGB8P26012 769 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 AVPR1AP37288 418 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 MAPKAPK2P49137 400 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 IL10RBQ08334 325 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 TAF12Q16514 161 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 TEX26Q8N6G2 289 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 CDK5RAP1Q96SZ6 601 aaKnown RBP14.36□□□□□ -0.11
CLCN4-201ENST00000380829 TREX1Q9NSU2 369 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 UXTQ9UBK9 157 aaPredicted RBP14.36□□□□□ -0.11
CLCN4-201ENST00000380829 YIPF1Q9Y548 306 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 C2orf78A6NCI8 922 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 SCAMP3O14828 347 aaKnown RBP14.36□□□□□ -0.11
CLCN4-201ENST00000380829 PHGDHO43175 533 aaKnown RBP14.36□□□□□ -0.11
CLCN4-201ENST00000380829 ITM2AO43736 263 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 ABLIM3O94929 683 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 KLKB1P03952 638 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 SGSHP51688 502 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 INSCQ1MX18 579 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 SFT2D3Q587I9 215 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 SH2D4BQ5SQS7 431 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 LPCAT4Q643R3 524 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 ALYREFQ86V81 257 aaKnown RBP14.36□□□□□ -0.11
CLCN4-201ENST00000380829 PDZD8Q8NEN9 1154 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 OR7D4Q8NG98 312 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 OR6Y1Q8NGX8 325 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 ARRDC2Q8TBH0 407 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 FATE1Q969F0 183 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 PRICKLE1Q96MT3 831 aaPredicted RBP14.36□□□□□ -0.11
CLCN4-201ENST00000380829 ZNF558Q96NG5 402 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 GPR22Q99680 433 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 CCDC28BQ9BUN5 200 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 RNF38Q9H0F5 515 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 RMI1Q9H9A7 625 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 COPG2Q9UBF2 871 aa14.36□□□□□ -0.11
CLCN4-201ENST00000380829 CCDC160A6NGH7 325 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 BUD23O43709 281 aaKnown RBP14.35□□□□□ -0.11
CLCN4-201ENST00000380829 ENO1P06733 434 aaKnown RBP14.35□□□□□ -0.11
CLCN4-201ENST00000380829 SLC1A2P43004 574 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 ALDH1A3P47895 512 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 SLC11A2P49281 568 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 SERPINH1P50454 418 aaKnown RBP14.35□□□□□ -0.11
CLCN4-201ENST00000380829 BTG3Q14201 252 aaPredicted RBP14.35□□□□□ -0.11
CLCN4-201ENST00000380829 ZNF470Q6ECI4 717 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 CRLF3Q8IUI8 442 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 CCDC117Q8IWD4 279 aaPredicted RBP14.35□□□□□ -0.11
CLCN4-201ENST00000380829 SLC39A11Q8N1S5 342 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 RAB3IL1Q8TBN0 382 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 WBP2Q969T9 261 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 SEMA3CQ99985 751 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 NMUR2Q9GZQ4 415 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 CRISPLD2Q9H0B8 497 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 RHOJQ9H4E5 214 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 ATP13A1Q9HD20 1204 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 VPS45Q9NRW7 570 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 NSMCE4AQ9NXX6 385 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 TRPM5Q9NZQ8 1165 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 TDRKHQ9Y2W6 561 aaKnown RBP14.35□□□□□ -0.11
CLCN4-201ENST00000380829 MIA3Q5JRA6 1907 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 B2RBV5 119 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 PRAMEF11O60813 436 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 MPOP05164 745 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 CLTBP09497 229 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 CORO1AP31146 461 aaKnown RBP14.35□□□□□ -0.11
CLCN4-201ENST00000380829 AQP4P55087 323 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 YBEYP58557 167 aaPredicted RBP14.35□□□□□ -0.11
CLCN4-201ENST00000380829 DLG1Q12959 904 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 ZNF235Q14590 738 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 ZNF460Q14592 562 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 USP10Q14694 798 aaKnown RBP14.35□□□□□ -0.11
CLCN4-201ENST00000380829 HSF5Q4G112 596 aaPredicted RBP14.35□□□□□ -0.11
CLCN4-201ENST00000380829 IL31Q6EBC2 164 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 RBM44Q6ZP01 1051 aaKnown RBP14.35□□□□□ -0.11
CLCN4-201ENST00000380829 CLEC14AQ86T13 490 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 SLC41A1Q8IVJ1 513 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms