RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 MTHFRP42898 656 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 CASP4P49662 377 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 EIF6P56537 245 aaKnown RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 CCNA1P78396 465 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 DAB2P98082 770 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 ABRQ12979 859 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 BTN1A1Q13410 526 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 SLC12A1Q13621 1099 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 DCAF8Q5TAQ9 597 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 ZNF767PQ75MW2 155 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 MAPKAPK5Q8IW41 473 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 OFCC1Q8IZS5 231 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 IPCEF1Q8WWN9 437 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 PROX1Q92786 737 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 BIRC7Q96CA5 298 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 TWNKQ96RR1 684 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 KIFC1Q9BW19 673 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 BCL2L14Q9BZR8 327 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 PPA2Q9H2U2 334 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 ZNF556Q9HAH1 456 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 NPAP1Q9NZP6 1156 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 TINAGQ9UJW2 476 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 PRPF19Q9UMS4 504 aaKnown RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 GINS2Q9Y248 185 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 PSAT1Q9Y617 370 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 F8W036 122 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 APOA1P02647 267 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 CYP2A6P11509 494 aaPredicted RBP9.42□□□□□ -0.9
PTPRA-204ENST00000380393 IL7P13232 177 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 RPP38P78345 283 aaKnown RBP9.42□□□□□ -0.9
PTPRA-204ENST00000380393 TNK2Q07912 1038 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 POLD3Q15054 466 aaPredicted RBP9.42□□□□□ -0.9
PTPRA-204ENST00000380393 SLC35G1Q2M3R5 365 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 EFHC2Q5JST6 749 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 FCRLBQ6BAA4 426 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 OR6Q1Q8NGQ2 317 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 LPPQ93052 612 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 LRRC39Q96DD0 335 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 HSFY1Q96LI6 401 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 ADI1Q9BV57 179 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 LHPPQ9H008 270 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 TMEM168Q9H0V1 697 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 IKZF4Q9H2S9 585 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 NGRNQ9NPE2 291 aaKnown RBP9.42□□□□□ -0.9
PTPRA-204ENST00000380393 TRMT6Q9UJA5 497 aaKnown RBP9.42□□□□□ -0.9
PTPRA-204ENST00000380393 SNCAIPQ9Y6H5 919 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 SAGE2PA6NJ88 616 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 PPM1BO75688 479 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 IL18RAPO95256 599 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 CPNE6O95741 557 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 GOT2P00505 430 aaKnown RBP9.42□□□□□ -0.9
PTPRA-204ENST00000380393 POLR2IP36954 125 aaKnown RBP9.42□□□□□ -0.9
PTPRA-204ENST00000380393 PTGER2P43116 358 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 MFAP3P55082 362 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 NME5P56597 212 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 ERVK-8P63133 956 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 DGUOKQ16854 277 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 MFSD14BQ5SR56 506 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 CATSPEREQ5SY80 951 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 PDPK2PQ6A1A2 396 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 ABRAXAS1Q6UWZ7 409 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 NSMFQ6X4W1 530 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 TSPYL5Q86VY4 417 aaPredicted RBP9.42□□□□□ -0.9
PTPRA-204ENST00000380393 CPNE8Q86YQ8 564 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 BDH2Q9BUT1 245 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 SLC13A1Q9BZW2 595 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 NOL11Q9H8H0 719 aaKnown RBP9.42□□□□□ -0.9
PTPRA-204ENST00000380393 CCDC59Q9P031 241 aaKnown RBP9.42□□□□□ -0.9
PTPRA-204ENST00000380393 CNTN3Q9P232 1028 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 MAD2L2Q9UI95 211 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 MICAL3Q7RTP6 2002 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 TLR3O15455 904 aaKnown RBP9.42□□□□□ -0.9
PTPRA-204ENST00000380393 ECDO95905 644 aaPredicted RBP9.42□□□□□ -0.9
PTPRA-204ENST00000380393 KRT19P08727 400 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 RBP1P09455 135 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 GAP43P17677 238 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 ATP2B4P23634 1241 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 TPMTP51580 245 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 HIST2H2ACQ16777 129 aaPredicted RBP9.42□□□□□ -0.9
PTPRA-204ENST00000380393 TYW3Q6IPR3 259 aaKnown RBP9.42□□□□□ -0.9
PTPRA-204ENST00000380393 C11orf63Q6NUN7 778 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 BRAT1Q6PJG6 821 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 CERS5Q8N5B7 392 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 TTLL6Q8N841 843 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 SLC5A5Q92911 643 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 C9orf16Q9BUW7 83 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 ROGDIQ9GZN7 287 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 SH3GLB2Q9NR46 395 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 FBXO8Q9NRD0 319 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 IL17RBQ9NRM6 502 aa9.42□□□□□ -0.9
PTPRA-204ENST00000380393 COPEO14579 308 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 DCXO43602 365 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 GMDSO60547 372 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 GNRH1P01148 92 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 TEKQ02763 1124 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 SPATS1Q496A3 300 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 METTL23Q86XA0 190 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 COLGALT2Q8IYK4 626 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 ATAD1Q8NBU5 361 aa9.41□□□□□ -0.9
PTPRA-204ENST00000380393 NELL1Q92832 810 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms