RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 IRF9Q00978 393 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 PRKCQQ04759 706 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 STX4Q12846 297 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 HIST2H2ACQ16777 129 aaPredicted RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 PPM1LQ5SGD2 360 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 NBPF12Q5TAG4 269 aaPredicted RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 HIST2H2AA3Q6FI13 130 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 NEK5Q6P3R8 708 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 FRMD7Q6ZUT3 714 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 NIPA1Q7RTP0 329 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 BRSK2Q8IWQ3 736 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 SELENOMQ8WWX9 145 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 SLC4A9Q96Q91 983 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 PANX1Q96RD7 426 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 POLR1EQ9GZS1 481 aaKnown RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 C1orf21Q9H246 121 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 TIMM22Q9Y584 194 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 SNTNA6NMZ2 147 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 CXorf49A8MYA2 514 aaPredicted RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 TMCC2O75069 709 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 RECQL4O94761 1208 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 NOS3P29474 1203 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 SPRED3Q2MJR0 410 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 SH3BP5LQ7L8J4 393 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 XYLT1Q86Y38 959 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 KRT73Q86Y46 540 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 ST13P5Q8NFI4 369 aaPredicted RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 MCFD2Q8NI22 146 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 VAT1Q99536 393 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 BCAS3Q9H6U6 928 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 PCDHGC3Q9UN70 934 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 KIAA1217Q5T5P2 1943 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 PCP4L1A6NKN8 68 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 B4GALT5O43286 388 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 TBX1O43435 398 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 OR6B1O95007 311 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 CFHP08603 1231 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 NFICP08651 508 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 LTA4HP09960 611 aaKnown RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 EN1Q05925 392 aaPredicted RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 BOP1Q14137 746 aaKnown RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 GALNT3Q14435 633 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 SFT2D3Q587I9 215 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 SH3PXD2AQ5TCZ1 1133 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 DENND6AQ8IWF6 608 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 IZUMO1Q8IYV9 350 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 TBC1D21Q8IYX1 336 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 ZNF614Q8N883 585 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 PPP1R13LQ8WUF5 828 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 SLC47A1Q96FL8 570 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 LIN28AQ9H9Z2 209 aaKnown RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 RPRD1BQ9NQG5 326 aaKnown RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 PCDHB7Q9Y5E2 793 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 PCDHA2Q9Y5H9 948 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 TEX264Q9Y6I9 313 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 KIF13BQ9NQT8 1826 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 ZBTB24O43167 697 aaPredicted RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 RECQL5O94762 991 aaPredicted RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 CYP1A1P04798 512 aaPredicted RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 IL12AP29459 219 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 SLC11A2P49281 568 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 TXNRD3NBQ6F5E7 133 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 SFRP1Q8N474 314 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 OR52E6Q96RD3 313 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 ING3Q9NXR8 418 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 SMPD3Q9NY59 655 aaPredicted RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 ZNHIT2Q9UHR6 403 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 OAZ3Q9UMX2 235 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 CLDN25C9JDP6 229 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 AMHP03971 560 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 NCK1P16333 377 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 NFKB1P19838 968 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 KLRC2P26717 231 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 SRP54P61011 504 aaKnown RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 CNTN1Q12860 1018 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 VEPH1Q14D04 833 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 IL23RQ5VWK5 629 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 NEPROQ6NW34 567 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 GALNT18Q6P9A2 607 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 CNSTQ6PJW8 725 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 CLYBLQ8N0X4 340 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 CACTIN-AS1Q8N1I8 211 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 CDYL2Q8N8U2 506 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 PPP1R14BQ96C90 147 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 EPB41L4BQ9H329 900 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 NUP214P35658 2090 aaPredicted RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 CNTNAP4Q9C0A0 1308 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 SLC15A5A6NIM6 579 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 MATN2O00339 956 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 GRIK3Q13003 919 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 NAB1Q13506 487 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 SIM2Q14190 667 aaPredicted RBP4.21□□□□□ -1.74
BRCA2-201ENST00000380152 FAM187BQ17R55 369 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 INSCQ1MX18 579 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 TEX44Q53QW1 395 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 SLC27A1Q6PCB7 646 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 RAB42Q8N4Z0 105 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 REPS2Q8NFH8 660 aa4.21□□□□□ -1.74
BRCA2-201ENST00000380152 OR2T34Q8NGX1 318 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms