RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 LINC01553A4QN01 128 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 SOX1O00570 391 aaPredicted RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 TPST1O60507 370 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 CLPTM1O96005 669 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 MT-CYBP00156 380 aaPredicted RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 ADRA2AP08913 450 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 SLC35E2BP0CK96 405 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 MTHFD1P11586 935 aaKnown RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 CHRNA4P43681 627 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 CAV1Q03135 178 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 LAMTOR4Q0VGL1 99 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 NME3Q13232 169 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 COL9A2Q14055 689 aaPredicted RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 PLCL1Q15111 1095 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 AARS2Q5JTZ9 985 aaKnown RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 POTEHQ6S545 545 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 GLB1LQ6UWU2 654 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 FAM131BQ86XD5 332 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 KDM1BQ8NB78 822 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 TXNDC5Q8NBS9 432 aaKnown RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 OR2T3Q8NH03 318 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 CANT1Q8WVQ1 401 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 FAM49AQ9H0Q0 323 aaPredicted RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 EXOC7Q9UPT5 735 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 ST14Q9Y5Y6 855 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 F8W810 466 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 TRMUO75648 421 aaKnown RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 ATP5HO75947 161 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 INHBAP08476 426 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 CCDC130P13994 396 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 HARS2P49590 506 aaKnown RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 BMXP51813 675 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 NAGLUP54802 743 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 CTBP1Q13363 440 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 ADGRE1Q14246 886 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 PDCD2Q16342 344 aaPredicted RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 GEN1Q17RS7 908 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 SCYL2Q6P3W7 929 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 ZPBP2Q6X784 338 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 CHSY3Q70JA7 882 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 ARL10Q8N8L6 244 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 MAFAQ8NHW3 353 aaPredicted RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 C12orf43Q96C57 262 aaKnown RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 GUCD1Q96NT3 240 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 BARD1Q99728 777 aaKnown RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 CLSTN3Q9BQT9 956 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 STMN4Q9H169 189 aaPredicted RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 PNPLA8Q9NP80 782 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 GIN1Q9NXP7 522 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 A8MXQ7 604 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 ALDH1A2O94788 518 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 TROVE2P10155 538 aaKnown RBP eCLIP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 ENO3P13929 434 aaPredicted RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 CAPRIN1Q14444 709 aaKnown RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 NKG7Q16617 165 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 GSTA3Q16772 222 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 HSP90AA5PQ58FG0 334 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 RBM20Q5T481 1227 aaKnown RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 TMEM184AQ6ZMB5 413 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 Q6ZNX1 250 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 CATSPER4Q7RTX7 472 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 ZNF598Q86UK7 904 aaKnown RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 ZC3H7AQ8IWR0 971 aaKnown RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 CNTD1Q8N815 330 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 DQX1Q8TE96 717 aaKnown RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 STMN2Q93045 179 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 DGCR14Q96DF8 476 aaKnown RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 RTP4Q96DX8 246 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 ZNF558Q96NG5 402 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 IQCGQ9H095 443 aaKnown RBP7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 SMOC2Q9H3U7 446 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 PIF1Q9H611 641 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 THEGQ9P2T0 379 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 POU2F3Q9UKI9 436 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 DERAQ9Y315 318 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 ACTL7AQ9Y615 435 aa7.42□□□□□ -1.22
GPCPD1-201ENST00000379019 SYNJ2BP-COX16A0A087WUM0 186 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 STAMBPO95630 424 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 PIGRP01833 764 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 SAT1P21673 171 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 PROZP22891 400 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 CD52P31358 61 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 TMED1Q13445 227 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 XAF1Q6GPH4 301 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 ZNF567Q8N184 647 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 PFDN4Q9NQP4 134 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 COX16Q9P0S2 106 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 YBX2Q9Y2T7 364 aaKnown RBP7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 LACTBL1A8MY62 500 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 H3BMQ9 156 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 MATN2O00339 956 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 TOR1BO14657 336 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 MCF2P10911 925 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 NCK1P16333 377 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 PRDX3P30048 256 aaKnown RBP7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 MAN1A1P33908 653 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 NDST1P52848 882 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 COPAP53621 1224 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms