RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 CYTH1Q15438 398 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 TSNAXIP1Q2TAA8 658 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 MUM1Q2TAK8 710 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 ALG1LQ6GMV1 187 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 WDR60Q8WVS4 1066 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 YIPF3Q9GZM5 350 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 TAS2R1Q9NYW7 299 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 TOP3BO95985 862 aaKnown RBP19.56■□□□□ 0.72
SSU72-204ENST00000378726 ATXN1LP0C7T5 689 aaKnown RBP19.56■□□□□ 0.72
SSU72-204ENST00000378726 MYL2P10916 166 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 PAMP19021 973 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 MZF1P28698 734 aaPredicted RBP19.56■□□□□ 0.72
SSU72-204ENST00000378726 SERPINB4P48594 390 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 SCNN1BP51168 640 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 CSE1LP55060 971 aaKnown RBP19.56■□□□□ 0.72
SSU72-204ENST00000378726 CCDC6Q16204 474 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 PPM1JQ5JR12 505 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 ZNF783Q6ZMS7 281 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 RANBP9Q96S59 729 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 MTIF3Q9H2K0 278 aaKnown RBP19.56■□□□□ 0.72
SSU72-204ENST00000378726 NSMCE4AQ9NXX6 385 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 ARMCX1Q9P291 453 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 STOML1Q9UBI4 398 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 RWDD3Q9Y3V2 267 aa19.56■□□□□ 0.72
SSU72-204ENST00000378726 CHD5Q8TDI0 1954 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 NVLO15381 856 aaKnown RBP19.55■□□□□ 0.72
SSU72-204ENST00000378726 RFPL2O75678 378 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 EPOP01588 193 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 MYOGP15173 224 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 ARNTP27540 789 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 CCR2P41597 374 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 ABCG1P45844 678 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 RGRP47804 291 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 ARF5P84085 180 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 KRT72Q14CN4 511 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 ALYREFQ86V81 257 aaKnown RBP19.55■□□□□ 0.72
SSU72-204ENST00000378726 FAM217AQ8IXS0 508 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 ZNF483Q8TF39 744 aaPredicted RBP19.55■□□□□ 0.72
SSU72-204ENST00000378726 DDI1Q8WTU0 396 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 FEM1CQ96JP0 617 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 FEM1AQ9BSK4 669 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 DCDC2Q9UHG0 476 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 ZNF510Q9Y2H8 683 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 ALPK3Q96L96 1907 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 FCHO1O14526 889 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 TIMM44O43615 452 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 SNAP91O60641 907 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 AHSGP02765 367 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 ESRRAP11474 423 aaPredicted RBP19.55■□□□□ 0.72
SSU72-204ENST00000378726 IRS1P35568 1242 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 VHLP40337 213 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 UBE3AQ05086 875 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 CTBP1Q13363 440 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 THOC5Q13769 683 aaKnown RBP19.55■□□□□ 0.72
SSU72-204ENST00000378726 ARMC3Q5W041 872 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 BBS7Q8IWZ6 715 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 MCUR1Q96AQ8 359 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 EXOC2Q96KP1 924 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 MCMBPQ9BTE3 642 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 SNX15Q9NRS6 342 aa19.55■□□□□ 0.72
SSU72-204ENST00000378726 TSTD2Q5T7W7 516 aa19.54■□□□□ 0.72
SSU72-204ENST00000378726 KIAA0930Q6ICG6 404 aaPredicted RBP19.54■□□□□ 0.72
SSU72-204ENST00000378726 LINGO4Q6UY18 593 aa19.54■□□□□ 0.72
SSU72-204ENST00000378726 CMC1Q7Z7K0 106 aa19.54■□□□□ 0.72
SSU72-204ENST00000378726 DENND6AQ8IWF6 608 aa19.54■□□□□ 0.72
SSU72-204ENST00000378726 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.54■□□□□ 0.72
SSU72-204ENST00000378726 TDRD5Q8NAT2 981 aaKnown RBP19.54■□□□□ 0.72
SSU72-204ENST00000378726 NSMCE3Q96MG7 304 aa19.54■□□□□ 0.72
SSU72-204ENST00000378726 MECRQ9BV79 373 aa19.54■□□□□ 0.72
SSU72-204ENST00000378726 NMUR2Q9GZQ4 415 aa19.54■□□□□ 0.72
SSU72-204ENST00000378726 SMG9Q9H0W8 520 aaKnown RBP19.54■□□□□ 0.72
SSU72-204ENST00000378726 SPATS2LQ9NUQ6 558 aaKnown RBP19.54■□□□□ 0.72
SSU72-204ENST00000378726 VPS28Q9UK41 221 aa19.54■□□□□ 0.72
SSU72-204ENST00000378726 LEFTY2O00292 366 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 GRM6O15303 877 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 INSIG1O15503 277 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 ARHGEF15O94989 841 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 PSMG1O95456 288 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 CD160O95971 181 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 PTPN2P17706 415 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 HLA-DPA1P20036 260 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 GABRB3P28472 473 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 CPA2P48052 419 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 CDH18Q13634 790 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 CAMK1Q14012 370 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 HSF5Q4G112 596 aaPredicted RBP19.53■□□□□ 0.72
SSU72-204ENST00000378726 RNF135Q8IUD6 432 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 CNTN4Q8IWV2 1026 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 DTX3LQ8TDB6 740 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 FAM136AQ96C01 138 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 VPS39Q96JC1 886 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 MAN1C1Q9NR34 630 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 TBX10O75333 385 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 ZMPSTE24O75844 475 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 CR2P20023 1033 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 SERPINB8P50452 374 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 MRPS35P82673 323 aaKnown RBP19.53■□□□□ 0.72
SSU72-204ENST00000378726 GALNT3Q14435 633 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 GPR158Q5T848 1215 aa19.53■□□□□ 0.72
SSU72-204ENST00000378726 C16orf46Q6P387 395 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms