RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 CKMT1AP12532 417 aa17.28■□□□□ 0.36
USP11-202ENST00000377078 ITIH2P19823 946 aa17.28■□□□□ 0.36
USP11-202ENST00000377078 RGRP47804 291 aa17.28■□□□□ 0.36
USP11-202ENST00000377078 LIG3P49916 1009 aa17.28■□□□□ 0.36
USP11-202ENST00000377078 PEX5P50542 639 aa17.28■□□□□ 0.36
USP11-202ENST00000377078 HES3Q5TGS1 186 aa17.28■□□□□ 0.36
USP11-202ENST00000377078 ZCCHC8Q6NZY4 707 aaKnown RBP17.28■□□□□ 0.36
USP11-202ENST00000377078 MAP7D3Q8IWC1 876 aa17.28■□□□□ 0.36
USP11-202ENST00000377078 FAM181AQ8N9Y4 354 aa17.28■□□□□ 0.36
USP11-202ENST00000377078 LMX1AQ8TE12 382 aa17.28■□□□□ 0.36
USP11-202ENST00000377078 GLMNQ92990 594 aa17.28■□□□□ 0.36
USP11-202ENST00000377078 NXPE2Q96DL1 559 aa17.28■□□□□ 0.36
USP11-202ENST00000377078 IL12RB2Q99665 862 aa17.28■□□□□ 0.36
USP11-202ENST00000377078 SCUBE2Q9NQ36 999 aa17.28■□□□□ 0.36
USP11-202ENST00000377078 APOBEC3BQ9UH17 382 aaKnown RBP17.28■□□□□ 0.36
USP11-202ENST00000377078 ARID1BQ8NFD5 2236 aaPredicted RBP17.27■□□□□ 0.36
USP11-202ENST00000377078 CFAP47Q6ZTR5 3102 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 SSU72P8A0A1W2PR75 194 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 K7ESM1 405 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 SOCS5O75159 536 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 KRT7P08729 469 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 ELFN1P0C7U0 828 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 GJC1P36383 396 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 SLC10A7Q0GE19 358 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 IRF4Q15306 451 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 RALGPS1Q5JS13 557 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 ZFYVE27Q5T4F4 411 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 FAXCQ5TGI0 409 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 MARC1Q5VT66 337 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 TP53I13Q8NBR0 393 aaPredicted RBP17.27■□□□□ 0.36
USP11-202ENST00000377078 KCTD6Q8NC69 237 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 MDM1Q8TC05 714 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 ECHDC3Q96DC8 303 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 APOLD1Q96LR9 279 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 TBATAQ96M53 351 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 DNAJC7Q99615 494 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 ETNK2Q9NVF9 386 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 DKK4Q9UBT3 224 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 CLCA2Q9UQC9 943 aa17.27■□□□□ 0.36
USP11-202ENST00000377078 ANKRD11Q6UB99 2663 aaPredicted RBP17.27■□□□□ 0.35
USP11-202ENST00000377078 KNTC1P50748 2209 aa17.27■□□□□ 0.35
USP11-202ENST00000377078 PLXNB3Q9ULL4 1909 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 TPP1O14773 563 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 MAFKO60675 156 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 NEBLO76041 1014 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 PROSCO94903 275 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 GP1BAP07359 652 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 MMP13P45452 471 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 RPIAP49247 311 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 PPARDQ03181 441 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 EIF2B5Q13144 721 aaKnown RBP17.26■□□□□ 0.35
USP11-202ENST00000377078 AGERQ15109 404 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 PDK2Q15119 407 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 PRRT3Q5FWE3 981 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 TXNRD3NBQ6F5E7 133 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 MARCH9Q86YJ5 346 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 PHACTR4Q8IZ21 702 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 CACTIN-AS1Q8N1I8 211 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 PDCD6IPQ8WUM4 868 aaKnown RBP17.26■□□□□ 0.35
USP11-202ENST00000377078 SCG3Q8WXD2 468 aaKnown RBP17.26■□□□□ 0.35
USP11-202ENST00000377078 RFFLQ8WZ73 363 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 NUDCD1Q96RS6 583 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 ZNF670Q9BS34 389 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 ABCG4Q9H172 646 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 MBNL1Q9NR56 388 aaKnown RBP17.26■□□□□ 0.35
USP11-202ENST00000377078 DOLKQ9UPQ8 538 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 COQ6Q9Y2Z9 468 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 ZFHX4Q86UP3 3567 aa17.26■□□□□ 0.35
USP11-202ENST00000377078 MUSKO15146 869 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 CAPNS1P04632 268 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 TMEM253P0C7T8 217 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 KRT10P13645 584 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 MAN1A1P33908 653 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 TARDBPQ13148 414 aaKnown RBP eCLIP17.25■□□□□ 0.35
USP11-202ENST00000377078 MTM1Q13496 603 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 CAMK2BQ13554 666 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 WSCD2Q2TBF2 565 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 TIGD7Q6NT04 549 aaPredicted RBP17.25■□□□□ 0.35
USP11-202ENST00000377078 ZSWIM9Q86XI8 627 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 CNGA4Q8IV77 575 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 VSTM4Q8IW00 320 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 TP53INP2Q8IXH6 220 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 NDUFAF2Q8N183 169 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 FSTL5Q8N475 847 aaPredicted RBP17.25■□□□□ 0.35
USP11-202ENST00000377078 RNF214Q8ND24 703 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 FAM71BQ8TC56 605 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 CCDC42Q96M95 316 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 MGME1Q9BQP7 344 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 ABHD10Q9NUJ1 306 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 KCTD5Q9NXV2 234 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 KLF15Q9UIH9 416 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 SALL4Q9UJQ4 1053 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 NENFQ9UMX5 172 aa17.25■□□□□ 0.35
USP11-202ENST00000377078 TDRD6O60522 2096 aaKnown RBP17.25■□□□□ 0.35
USP11-202ENST00000377078 LMO7DNF2Z398 122 aa17.24■□□□□ 0.35
USP11-202ENST00000377078 CACNB4O00305 520 aaPredicted RBP17.24■□□□□ 0.35
USP11-202ENST00000377078 TRAFD1O14545 582 aaPredicted RBP17.24■□□□□ 0.35
USP11-202ENST00000377078 MFAP3LO75121 409 aa17.24■□□□□ 0.35
USP11-202ENST00000377078 CPP00450 1065 aa17.24■□□□□ 0.35
USP11-202ENST00000377078 PRKCGP05129 697 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms