RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 CDKN2DP55273 166 aa21.81■■□□□ 1.08
RNF39-202ENST00000376751 PRAMEP78395 509 aa21.81■■□□□ 1.08
RNF39-202ENST00000376751 MXRA7P84157 204 aa21.81■■□□□ 1.08
RNF39-202ENST00000376751 SLC25A3Q00325 362 aa21.81■■□□□ 1.08
RNF39-202ENST00000376751 ACVR1Q04771 509 aa21.81■■□□□ 1.08
RNF39-202ENST00000376751 ARHGAP24Q8N264 748 aa21.81■■□□□ 1.08
RNF39-202ENST00000376751 PDZD8Q8NEN9 1154 aa21.81■■□□□ 1.08
RNF39-202ENST00000376751 OVCA2Q8WZ82 227 aa21.81■■□□□ 1.08
RNF39-202ENST00000376751 VWCEQ96DN2 955 aa21.81■■□□□ 1.08
RNF39-202ENST00000376751 PPP1R36Q96LQ0 422 aa21.81■■□□□ 1.08
RNF39-202ENST00000376751 TBATAQ96M53 351 aa21.81■■□□□ 1.08
RNF39-202ENST00000376751 TRIB3Q96RU7 358 aa21.81■■□□□ 1.08
RNF39-202ENST00000376751 LBHD1Q9BQE6 289 aaPredicted RBP21.81■■□□□ 1.08
RNF39-202ENST00000376751 MGME1Q9BQP7 344 aa21.81■■□□□ 1.08
RNF39-202ENST00000376751 THTPAQ9BU02 230 aa21.81■■□□□ 1.08
RNF39-202ENST00000376751 SPON2Q9BUD6 331 aa21.81■■□□□ 1.08
RNF39-202ENST00000376751 C1orf21Q9H246 121 aa21.81■■□□□ 1.08
RNF39-202ENST00000376751 DCLRE1BQ9H816 532 aa21.81■■□□□ 1.08
RNF39-202ENST00000376751 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.81■■□□□ 1.08
RNF39-202ENST00000376751 AFF4Q9UHB7 1163 aaKnown RBP21.81■■□□□ 1.08
RNF39-202ENST00000376751 DCXO43602 365 aa21.8■■□□□ 1.08
RNF39-202ENST00000376751 WISP3O95389 354 aaPredicted RBP21.8■■□□□ 1.08
RNF39-202ENST00000376751 JUNP05412 331 aaKnown RBP21.8■■□□□ 1.08
RNF39-202ENST00000376751 HLA-DPA1P20036 260 aa21.8■■□□□ 1.08
RNF39-202ENST00000376751 KCNA5P22460 613 aa21.8■■□□□ 1.08
RNF39-202ENST00000376751 CORO1AP31146 461 aaKnown RBP21.8■■□□□ 1.08
RNF39-202ENST00000376751 CCNG1P51959 295 aa21.8■■□□□ 1.08
RNF39-202ENST00000376751 CDH4P55283 916 aa21.8■■□□□ 1.08
RNF39-202ENST00000376751 PEX6Q13608 980 aa21.8■■□□□ 1.08
RNF39-202ENST00000376751 SLC14A2Q15849 920 aa21.8■■□□□ 1.08
RNF39-202ENST00000376751 IL31Q6EBC2 164 aa21.8■■□□□ 1.08
RNF39-202ENST00000376751 RNF135Q8IUD6 432 aa21.8■■□□□ 1.08
RNF39-202ENST00000376751 SCUBE1Q8IWY4 988 aa21.8■■□□□ 1.08
RNF39-202ENST00000376751 CCNYL1Q8N7R7 359 aa21.8■■□□□ 1.08
RNF39-202ENST00000376751 ANKRD49Q8WVL7 239 aa21.8■■□□□ 1.08
RNF39-202ENST00000376751 CEP295NLQ96MC4 621 aa21.8■■□□□ 1.08
RNF39-202ENST00000376751 POMKQ9H5K3 350 aa21.8■■□□□ 1.08
RNF39-202ENST00000376751 TCF7L2Q9NQB0 619 aa21.8■■□□□ 1.08
RNF39-202ENST00000376751 NEMP1O14524 444 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 HDAC3O15379 428 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 IRF1P10914 325 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 CD1EP15812 388 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 COPAP53621 1224 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 PRKAA1Q13131 559 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 PLD1Q13393 1074 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 NAA25Q14CX7 972 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 ARHGEF6Q15052 776 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 RCN1Q15293 331 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 KLHDC10Q6PID8 442 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 TMEM207Q6UWW9 146 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 OR13C4Q8NGS5 318 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 ZNF570Q96NI8 536 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 RNF38Q9H0F5 515 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 C2orf78A6NCI8 922 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 GOT2P00505 430 aaKnown RBP21.79■■□□□ 1.08
RNF39-202ENST00000376751 LMNAP02545 664 aaKnown RBP21.79■■□□□ 1.08
RNF39-202ENST00000376751 TFEBP19484 476 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 NSUN2Q08J23 767 aaKnown RBP eCLIP21.79■■□□□ 1.08
RNF39-202ENST00000376751 SEMA3AQ14563 771 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 SEL1L3Q68CR1 1132 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 KIAA1841Q6NSI8 718 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 FAM43BQ6ZT52 329 aaPredicted RBP21.79■■□□□ 1.08
RNF39-202ENST00000376751 PIM3Q86V86 326 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 PLD4Q96BZ4 506 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 EXOC2Q96KP1 924 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 UBA2Q9UBT2 640 aaPredicted RBP21.79■■□□□ 1.08
RNF39-202ENST00000376751 SLC7A8Q9UHI5 535 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 OGDHLQ9ULD0 1010 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 YIPF1Q9Y548 306 aa21.79■■□□□ 1.08
RNF39-202ENST00000376751 CCDC162PA2VCL2 907 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 TMEM233B4DJY2 109 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 TSPAN3O60637 253 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 ABLIM3O94929 683 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 PSMG1O95456 288 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 SERPINF2P08697 491 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 LTA4HP09960 611 aaKnown RBP21.78■■□□□ 1.08
RNF39-202ENST00000376751 CCDC166P0CW27 439 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 ATP5F1P24539 256 aaPredicted RBP21.78■■□□□ 1.08
RNF39-202ENST00000376751 EPHA3P29320 983 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 APLP1P51693 650 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 OXCT1P55809 520 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 PFKPQ01813 784 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 KLF10Q13118 480 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 ANKRD33Q7Z3H0 272 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 TMCO2Q7Z6W1 182 aaPredicted RBP21.78■■□□□ 1.08
RNF39-202ENST00000376751 UBXN10Q96LJ8 280 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 NUF2Q9BZD4 464 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 CYP4F11Q9HBI6 524 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 GPAMQ9HCL2 828 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 SEPT3Q9UH03 358 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 VWA7Q9Y334 891 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 SPO11Q9Y5K1 396 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 ANKRD36A6QL64 1941 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 A0A088AWK7 358 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 KDELR3O43731 214 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 ZMPSTE24O75844 475 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 NDST3O95803 873 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 EPOP01588 193 aa21.78■■□□□ 1.08
RNF39-202ENST00000376751 RPSAP08865 295 aaKnown RBP21.78■■□□□ 1.08
RNF39-202ENST00000376751 KPNA2P52292 529 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms