RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CCDC166P0CW27 439 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 SLC1A2P43004 574 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 GLRBP48167 497 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 EMP3P54852 163 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 DSC2Q02487 901 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 DUSP4Q13115 394 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 TMED1Q13445 227 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 TCTN1Q2MV58 587 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 RABGAP1LQ5R372 815 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 FUT10Q6P4F1 479 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 CIR1Q86X95 450 aaPredicted RBP14.08□□□□□ -0.15
MSH5-202ENST00000375740 ZNF781Q8N8C0 355 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 SLC26A7Q8TE54 656 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 GIPC2Q8TF65 315 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 GDPD5Q8WTR4 605 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 KCTD4Q8WVF5 259 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 PRICKLE1Q96MT3 831 aaPredicted RBP14.08□□□□□ -0.15
MSH5-202ENST00000375740 GATA5Q9BWX5 397 aaPredicted RBP14.08□□□□□ -0.15
MSH5-202ENST00000375740 ACE2Q9BYF1 805 aaPredicted RBP14.08□□□□□ -0.15
MSH5-202ENST00000375740 CREBZFQ9NS37 354 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 OLA1Q9NTK5 396 aaKnown RBP14.08□□□□□ -0.15
MSH5-202ENST00000375740 OXSMQ9NWU1 459 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 ZDHHC7Q9NXF8 308 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 LRFN2Q9ULH4 789 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 HEMK1Q9Y5R4 338 aaPredicted RBP14.08□□□□□ -0.15
MSH5-202ENST00000375740 DRGXA6NNA5 263 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 SPECC1L-ADORA2AF8WAN1 911 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 TK2O00142 265 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 HNRNPCP07910 306 aaKnown RBP eCLIP14.08□□□□□ -0.16
MSH5-202ENST00000375740 SBK3P0C264 359 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 ALOX15P16050 662 aaPredicted RBP14.08□□□□□ -0.16
MSH5-202ENST00000375740 PAMP19021 973 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 SLC12A1Q13621 1099 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 ZNF460Q14592 562 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 TBCCQ15814 346 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 DEFB115Q30KQ5 88 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 C6orf163Q5TEZ5 329 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 CEP97Q8IW35 865 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 SPPL2BQ8TCT7 592 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 MYEOVQ96EZ4 313 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 SCYL1Q96KG9 808 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 GCNAQ96QF7 691 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 CCSER2Q9H7U1 834 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 ARNT2Q9HBZ2 717 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 ACSS2Q9NR19 701 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 SORCS3Q9UPU3 1222 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 ACOT9Q9Y305 439 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 SMIM31A0A1B0GVY4 71 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 FAM95CA0A1B0GW59 222 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 TBC1D4O60343 1298 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 SIN3BO75182 1162 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 PDE5AO76074 875 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 APOA4P06727 396 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 MMP2P08253 660 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 PIM1P11309 404 aaPredicted RBP14.08□□□□□ -0.16
MSH5-202ENST00000375740 ADARP55265 1226 aaKnown RBP14.08□□□□□ -0.16
MSH5-202ENST00000375740 NADK2Q4G0N4 442 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 KIAA0930Q6ICG6 404 aaPredicted RBP14.08□□□□□ -0.16
MSH5-202ENST00000375740 C2CD4AQ8NCU7 369 aaPredicted RBP14.08□□□□□ -0.16
MSH5-202ENST00000375740 ZFP28Q8NHY6 868 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 MIPOL1Q8TD10 442 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 SREK1Q8WXA9 508 aaKnown RBP14.08□□□□□ -0.16
MSH5-202ENST00000375740 FATE1Q969F0 183 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 CCDC124Q96CT7 223 aaKnown RBP14.08□□□□□ -0.16
MSH5-202ENST00000375740 SPATA17Q96L03 361 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 TSNARE1Q96NA8 513 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 RPRD1AQ96P16 312 aaPredicted RBP14.08□□□□□ -0.16
MSH5-202ENST00000375740 ATP13A1Q9HD20 1204 aa14.08□□□□□ -0.16
MSH5-202ENST00000375740 TDRKHQ9Y2W6 561 aaKnown RBP14.08□□□□□ -0.16
MSH5-202ENST00000375740 GREB1Q4ZG55 1949 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 MIA3Q5JRA6 1907 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 C15orf38-AP3S2A0A0A6YYH1 394 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 TMEM114B3SHH9 223 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 KLHL2O95198 593 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 IGLV3-27P01718 113 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 GALTP07902 379 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 ATP6V1B1P15313 513 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 AOC1P19801 751 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 CPOXP36551 454 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 ETFBP38117 255 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 NUMBP49757 651 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 SERPINH1P50454 418 aaKnown RBP14.07□□□□□ -0.16
MSH5-202ENST00000375740 CHN2P52757 468 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 EPHB1P54762 984 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 GK3PQ14409 553 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 POLD3Q15054 466 aaPredicted RBP14.07□□□□□ -0.16
MSH5-202ENST00000375740 ZNF470Q6ECI4 717 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 NEPROQ6NW34 567 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 ZYG11AQ6WRX3 759 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 ARPINQ7Z6K5 226 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 TMEM173Q86WV6 379 aaPredicted RBP14.07□□□□□ -0.16
MSH5-202ENST00000375740 CENPLQ8N0S6 344 aaPredicted RBP14.07□□□□□ -0.16
MSH5-202ENST00000375740 PGBD5Q8N414 524 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 TEX26Q8N6G2 289 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 POU5F2Q8N7G0 328 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 RIN3Q8TB24 985 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 PRKD2Q9BZL6 878 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 SHCBP1LQ9BZQ2 653 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 CDH19Q9H159 772 aa14.07□□□□□ -0.16
MSH5-202ENST00000375740 FAM96AQ9H5X1 160 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms