RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 NAA35Q5VZE5 725 aa5□□□□□ -1.61
USP48-202ENST00000374730 FAM160B1Q5W0V3 765 aa5□□□□□ -1.61
USP48-202ENST00000374730 PPP4R4Q6NUP7 873 aa5□□□□□ -1.61
USP48-202ENST00000374730 CRELD2Q6UXH1 353 aaPredicted RBP5□□□□□ -1.61
USP48-202ENST00000374730 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5□□□□□ -1.61
USP48-202ENST00000374730 GADL1Q6ZQY3 521 aa5□□□□□ -1.61
USP48-202ENST00000374730 C11orf96Q7Z7L8 435 aa5□□□□□ -1.61
USP48-202ENST00000374730 C14orf80Q86SX3 495 aa5□□□□□ -1.61
USP48-202ENST00000374730 HOOK3Q86VS8 718 aa5□□□□□ -1.61
USP48-202ENST00000374730 BRSK2Q8IWQ3 736 aa5□□□□□ -1.61
USP48-202ENST00000374730 MCOLN2Q8IZK6 566 aa5□□□□□ -1.61
USP48-202ENST00000374730 GPC2Q8N158 579 aa5□□□□□ -1.61
USP48-202ENST00000374730 SH2D3CQ8N5H7 860 aa5□□□□□ -1.61
USP48-202ENST00000374730 C3orf20Q8ND61 904 aa5□□□□□ -1.61
USP48-202ENST00000374730 DEPTORQ8TB45 409 aa5□□□□□ -1.61
USP48-202ENST00000374730 MAIP1Q8WWC4 291 aa5□□□□□ -1.61
USP48-202ENST00000374730 MAGOHBQ96A72 148 aaKnown RBP5□□□□□ -1.61
USP48-202ENST00000374730 ZBTB9Q96C00 473 aa5□□□□□ -1.61
USP48-202ENST00000374730 TLCD1Q96CP7 247 aa5□□□□□ -1.61
USP48-202ENST00000374730 VCPIP1Q96JH7 1222 aa5□□□□□ -1.61
USP48-202ENST00000374730 FAM167AQ96KS9 214 aa5□□□□□ -1.61
USP48-202ENST00000374730 FNBP1Q96RU3 617 aa5□□□□□ -1.61
USP48-202ENST00000374730 HEPHQ9BQS7 1158 aa5□□□□□ -1.61
USP48-202ENST00000374730 FAM213AQ9BRX8 229 aa5□□□□□ -1.61
USP48-202ENST00000374730 TRIM51Q9BSJ1 452 aa5□□□□□ -1.61
USP48-202ENST00000374730 LRFN3Q9BTN0 628 aa5□□□□□ -1.61
USP48-202ENST00000374730 TMEM109Q9BVC6 243 aa5□□□□□ -1.61
USP48-202ENST00000374730 SLC13A1Q9BZW2 595 aa5□□□□□ -1.61
USP48-202ENST00000374730 DPH5Q9H2P9 285 aa5□□□□□ -1.61
USP48-202ENST00000374730 PLEKHA4Q9H4M7 779 aa5□□□□□ -1.61
USP48-202ENST00000374730 LRRC19Q9H756 370 aa5□□□□□ -1.61
USP48-202ENST00000374730 TCF7L1Q9HCS4 588 aa5□□□□□ -1.61
USP48-202ENST00000374730 SEMA4GQ9NTN9 838 aa5□□□□□ -1.61
USP48-202ENST00000374730 RBAKQ9NYW8 714 aaPredicted RBP5□□□□□ -1.61
USP48-202ENST00000374730 GRHL1Q9NZI5 618 aa5□□□□□ -1.61
USP48-202ENST00000374730 CNOT8Q9UFF9 292 aaKnown RBP5□□□□□ -1.61
USP48-202ENST00000374730 MTRF1LQ9UGC7 380 aaKnown RBP5□□□□□ -1.61
USP48-202ENST00000374730 SLC12A6Q9UHW9 1150 aa5□□□□□ -1.61
USP48-202ENST00000374730 LCMT1Q9UIC8 334 aa5□□□□□ -1.61
USP48-202ENST00000374730 AGO2Q9UKV8 859 aaKnown RBP5□□□□□ -1.61
USP48-202ENST00000374730 MTUS1Q9ULD2 1270 aa5□□□□□ -1.61
USP48-202ENST00000374730 CDYLQ9Y232 598 aa5□□□□□ -1.61
USP48-202ENST00000374730 RRP15Q9Y3B9 282 aaKnown RBP5□□□□□ -1.61
USP48-202ENST00000374730 PCDHB2Q9Y5E7 798 aa5□□□□□ -1.61
USP48-202ENST00000374730 EVPLQ92817 2033 aa5□□□□□ -1.61
USP48-202ENST00000374730 PTPRJQ12913 1337 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 UMODL1Q5DID0 1318 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 PASKQ96RG2 1323 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 CNTNAP2Q9UHC6 1331 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 CITO14578 2027 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 A0A0B4J269 797 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 GSTTP1A0A1W2PQM5 241 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 LRRIQ4A6NIV6 560 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 TMEM110-MUSTN1A8MSY1 372 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 K7ERI5 159 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 MYO1CO00159 1063 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 EBAG9O00559 213 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 PSTPIP1O43586 416 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 PEX1O43933 1283 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 PROSCO94903 275 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 VNN1O95497 513 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 TGFB3P10600 412 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 TNNI1P19237 187 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 MAPK4P31152 587 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 NSFP46459 744 aaKnown RBP4.99□□□□□ -1.61
USP48-202ENST00000374730 RPL21P46778 160 aaKnown RBP4.99□□□□□ -1.61
USP48-202ENST00000374730 EFNA5P52803 228 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 PMS2P54278 862 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 SP2Q02086 613 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 SP4Q02446 784 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 NHLH1Q02575 133 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 POU5F1BQ06416 359 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 PIGFQ07326 219 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 PDCLQ13371 301 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 IL10RAQ13651 578 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 CAPSQ13938 189 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 VGLL4Q14135 290 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 SLMAPQ14BN4 828 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 PTGISQ16647 500 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 KRT71Q3SY84 523 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 COLEC12Q5KU26 742 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 ZNF362Q5T0B9 420 aaPredicted RBP4.99□□□□□ -1.61
USP48-202ENST00000374730 LIN9Q5TKA1 542 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 KCTD16Q68DU8 428 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 TTC27Q6P3X3 843 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 VWA1Q6PCB0 445 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 CCDC137Q6PK04 289 aaKnown RBP4.99□□□□□ -1.61
USP48-202ENST00000374730 METTL7BQ6UX53 244 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 B4GALNT4Q76KP1 1039 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 MON1BQ7L1V2 547 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 PHF13Q86YI8 300 aaPredicted RBP4.99□□□□□ -1.61
USP48-202ENST00000374730 BCAS4Q8TDM0 211 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 UBLCP1Q8WVY7 318 aaPredicted RBP4.99□□□□□ -1.61
USP48-202ENST00000374730 PPM1EQ8WY54 764 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 GLG1Q92896 1179 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 TMEM143Q96AN5 459 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 C18orf8Q96DM3 657 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 CLPTM1LQ96KA5 538 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 KLHL32Q96NJ5 620 aa4.99□□□□□ -1.61
USP48-202ENST00000374730 PCYT2Q99447 389 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms