RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 HMGCLP35914 325 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 CLCNKAP51800 687 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 SLMAPQ14BN4 828 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 IER5LQ5T953 404 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 KIAA0930Q6ICG6 404 aaPredicted RBP11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 PACS1Q6VY07 963 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 IQCHQ86VS3 1027 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 ATP11CQ8NB49 1132 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 TSEN2Q8NCE0 465 aaKnown RBP11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 STYXQ8WUJ0 223 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 IFT43Q96FT9 208 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 LOXL4Q96JB6 756 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 SEMA3CQ99985 751 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 PLAC1Q9HBJ0 212 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 RAI2Q9Y5P3 530 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 COL9A1P20849 921 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 DYNLT1P63172 113 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 BCL2L1Q07817 233 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 PCID2Q5JVF3 399 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 SPANXN3Q5MJ09 141 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 LYPLAL1Q5VWZ2 237 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 SLC36A4Q6YBV0 504 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 ZC3H18Q86VM9 953 aaKnown RBP11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 TDRPQ86YL5 185 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 ARRDC3Q96B67 414 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 SERPINB12Q96P63 405 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 C1QTNF2Q9BXJ5 285 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 MOCS1Q9NZB8 636 aa11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 KLHL8Q9P2G9 620 aaPredicted RBP11.23□□□□□ -0.61
CSGALNACT2-201ENST00000374466 TBC1D3BA6NDS4 549 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 TMEM63AO94886 807 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 NEK3P51956 506 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 SATB1Q01826 763 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 KDSRQ06136 332 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 CST6Q15828 149 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 SIRPB2Q5JXA9 342 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 ARMC12Q5T9G4 340 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 NUP205Q92621 2012 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 LDB2O43679 373 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 NRLP54845 237 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 DSC2Q02487 901 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 TYSND1Q2T9J0 566 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 FNDC3BQ53EP0 1204 aaKnown RBP11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 SLC26A11Q86WA9 606 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 CCDC110Q8TBZ0 833 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 HEXDCQ8WVB3 486 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 ORAI3Q9BRQ5 295 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 DUSP15Q9H1R2 295 aaPredicted RBP11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 NT5MQ9NPB1 228 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 SMARCAL1Q9NZC9 954 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 MUTYHQ9UIF7 546 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 SLCO3A1Q9UIG8 710 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 FCF1Q9Y324 198 aaKnown RBP11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 TCAF1Q9Y4C2 921 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 HS3ST3A1Q9Y663 406 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 TNFRSF10AO00220 468 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 NUDT17P0C025 328 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 GABRG2P18507 467 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 ACTN2P35609 894 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 STK19P49842 368 aaPredicted RBP11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 IZUMO3Q5VZ72 239 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 ADAMTSL4Q6UY14 1074 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 PID1Q7Z2X4 250 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 CCDC91Q7Z6B0 441 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 WDR83Q9BRX9 315 aaKnown RBP11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 LMAN1LQ9HAT1 526 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 COMMD10Q9Y6G5 202 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 FAM169AQ9Y6X4 670 aa11.22□□□□□ -0.61
CSGALNACT2-201ENST00000374466 TP53BP1Q12888 1972 aaPredicted RBP11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 HEATR9A2RTY3 570 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 RNASEH1O60930 286 aaKnown RBP11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 HEXIM1O94992 359 aaKnown RBP11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 KLF8O95600 359 aaPredicted RBP11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 H2AFXP16104 143 aaPredicted RBP11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 PGAM1P18669 254 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 P2RY2P41231 377 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 SOX9P48436 509 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 TAS2R38P59533 333 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 STARD3Q14849 445 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 ZNF658BQ4V348 819 aaPredicted RBP11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 CCDC38Q502W7 563 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 KIAA0408Q6ZU52 694 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 ZSWIM9Q86XI8 627 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 RASGRP3Q8IV61 690 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 ZBTB44Q8NCP5 570 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 CCNYQ8ND76 341 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 CAPZA3Q96KX2 299 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 MRGPRX1Q96LB2 322 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 SIT1Q9Y3P8 196 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 CEP192Q8TEP8 1941 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 CCDC151A5D8V7 595 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 K7ERQ8 282 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 RPS3P23396 243 aaKnown RBP eCLIP11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 ESRP1Q6NXG1 681 aaKnown RBP11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 PKN3Q6P5Z2 889 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 AGGF1Q8N302 714 aaeCLIP11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 DNASE2BQ8WZ79 361 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 EBNA1BP2Q99848 306 aaKnown RBP11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 IRF2BPLQ9H1B7 796 aa11.21□□□□□ -0.61
CSGALNACT2-201ENST00000374466 NSMCE4AQ9NXX6 385 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms