RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 HECTD2Q5U5R9 776 aa16.08■□□□□ 0.16
CNKSR1-202ENST00000374253 TMEM207Q6UWW9 146 aa16.08■□□□□ 0.16
CNKSR1-202ENST00000374253 ANKS3Q6ZW76 656 aa16.08■□□□□ 0.16
CNKSR1-202ENST00000374253 RYBPQ8N488 228 aaPredicted RBP16.08■□□□□ 0.16
CNKSR1-202ENST00000374253 BHMTQ93088 406 aa16.08■□□□□ 0.16
CNKSR1-202ENST00000374253 POLR1EQ9GZS1 481 aaKnown RBP16.08■□□□□ 0.16
CNKSR1-202ENST00000374253 ELAC1Q9H777 363 aaKnown RBP16.08■□□□□ 0.16
CNKSR1-202ENST00000374253 SMPD4Q9NXE4 827 aa16.08■□□□□ 0.16
CNKSR1-202ENST00000374253 GTSE1Q9NYZ3 720 aa16.08■□□□□ 0.16
CNKSR1-202ENST00000374253 PHF24Q9UPV7 400 aa16.08■□□□□ 0.16
CNKSR1-202ENST00000374253 PRAMEF11O60813 436 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 CIB2O75838 187 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 KLKB1P03952 638 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 ELF1P32519 619 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 ATP5C1P36542 298 aaKnown RBP16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 CLNS1AP54105 237 aaKnown RBP16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 KLF10Q13118 480 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 PARP15Q460N3 678 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 DNAL1Q4LDG9 190 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 TCHHL1Q5QJ38 904 aaPredicted RBP16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 SH2D4BQ5SQS7 431 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 GPR158Q5T848 1215 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 TRIM67Q6ZTA4 783 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 CCDC117Q8IWD4 279 aaPredicted RBP16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 DEFB107AQ8IZN7 70 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 ZNF296Q8WUU4 475 aaPredicted RBP16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 SPATA17Q96L03 361 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 DEFB118Q96PH6 123 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 PPP1R2P1Q96PQ5 205 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 TTC1Q99614 292 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 TNFRSF12AQ9NP84 129 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 HDAC3O15379 428 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 COCHO43405 550 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 ZDHHC11BP0C7U3 371 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 ALDH7A1P49419 539 aaKnown RBP16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 SCNN1BP51168 640 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 POU4F1Q01851 419 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 SEMA3AQ14563 771 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 KIAA1841Q6NSI8 718 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 ALG9Q9H6U8 611 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 NMRK1Q9NWW6 199 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 MID2Q9UJV3 735 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 SSX2IPQ9Y2D8 614 aa16.07■□□□□ 0.16
CNKSR1-202ENST00000374253 MROH6A6NGR9 719 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 AIM2O14862 343 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 ACSL4O60488 711 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 MT-CO1P00395 513 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 GOT2P00505 430 aaKnown RBP16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 COX4I1P13073 169 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 HOXD9P28356 352 aaPredicted RBP16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 LEPRP48357 1165 aaKnown RBP16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 KCNC1P48547 511 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 NAA25Q14CX7 972 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 TMCO4Q5TGY1 634 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 RDH11Q8TC12 318 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 PRICKLE1Q96MT3 831 aaPredicted RBP16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 FNIP2Q9P278 1114 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 DNMT3LQ9UJW3 386 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 RPL26L1Q9UNX3 145 aaKnown RBP16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 SORCS3Q9UPU3 1222 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 LOC285095A0A1B0GVY8 99 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 C2orf78A6NCI8 922 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 H7C4K7 107 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 BAG2O95816 211 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 S1PR4O95977 384 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 COL6A1P12109 1028 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 ITGAXP20702 1163 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 GNA12Q03113 381 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 MUM1Q2TAK8 710 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 LINGO4Q6UY18 593 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 HPS6Q86YV9 775 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 CRIPAKQ8N1N5 446 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 SNX31Q8N9S9 440 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 AUTS2Q8WXX7 1259 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 NAF1Q96HR8 494 aaKnown RBP16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 MRPL57Q9BQC6 102 aaKnown RBP16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 RNF38Q9H0F5 515 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 FAM96AQ9H5X1 160 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 VWA7Q9Y334 891 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 CDH23Q9H251 3354 aa16.06■□□□□ 0.16
CNKSR1-202ENST00000374253 CCDC162PA2VCL2 907 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 CBX4O00257 560 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 LMNAP02545 664 aaKnown RBP16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 ATP5BP06576 529 aaKnown RBP16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 COL6A2P12110 1019 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 PRKAA1Q13131 559 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 PLD1Q13393 1074 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 SPOUT1Q5T280 376 aaKnown RBP16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 SNX32Q86XE0 403 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 PYDC1Q8WXC3 89 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 CMTM5Q96DZ9 223 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 PDFQ9HBH1 243 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 TRIM17Q9Y577 477 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 A0A087X1B8 175 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 ZNF840PA6NDX5 716 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 H2AFYO75367 372 aaKnown RBP16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 CORO1AP31146 461 aaKnown RBP16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 MSX2P35548 267 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms