RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 ARID1BQ8NFD5 2236 aaPredicted RBP20.16■□□□□ 0.82
TMEM53-205ENST00000372244 A0A1W2PQ67 120 aa20.16■□□□□ 0.82
TMEM53-205ENST00000372244 A6NNZ2 444 aa20.16■□□□□ 0.82
TMEM53-205ENST00000372244 FPGTO14772 594 aa20.16■□□□□ 0.82
TMEM53-205ENST00000372244 IPO7O95373 1038 aaKnown RBP20.16■□□□□ 0.82
TMEM53-205ENST00000372244 KRT1P04264 644 aa20.16■□□□□ 0.82
TMEM53-205ENST00000372244 TNNT1P13805 278 aa20.16■□□□□ 0.82
TMEM53-205ENST00000372244 ZFXP17010 805 aaPredicted RBP20.16■□□□□ 0.82
TMEM53-205ENST00000372244 CES1P23141 567 aa20.16■□□□□ 0.82
TMEM53-205ENST00000372244 GRK6P43250 576 aa20.16■□□□□ 0.82
TMEM53-205ENST00000372244 PFN3P60673 137 aa20.16■□□□□ 0.82
TMEM53-205ENST00000372244 IL9RQ01113 521 aa20.16■□□□□ 0.82
TMEM53-205ENST00000372244 AGERQ15109 404 aa20.16■□□□□ 0.82
TMEM53-205ENST00000372244 KANSL1Q7Z3B3 1105 aa20.16■□□□□ 0.82
TMEM53-205ENST00000372244 KATNAL2Q8IYT4 538 aa20.16■□□□□ 0.82
TMEM53-205ENST00000372244 LRRN4Q8WUT4 740 aa20.16■□□□□ 0.82
TMEM53-205ENST00000372244 IFT43Q96FT9 208 aa20.16■□□□□ 0.82
TMEM53-205ENST00000372244 LGMNQ99538 433 aa20.16■□□□□ 0.82
TMEM53-205ENST00000372244 RBM22Q9NW64 420 aaKnown RBP eCLIP20.16■□□□□ 0.82
TMEM53-205ENST00000372244 WASF3Q9UPY6 502 aa20.16■□□□□ 0.82
TMEM53-205ENST00000372244 PCDHB9Q9Y5E1 797 aa20.16■□□□□ 0.82
TMEM53-205ENST00000372244 SPEGQ15772 3267 aa20.16■□□□□ 0.82
TMEM53-205ENST00000372244 APOL1O14791 398 aa20.15■□□□□ 0.82
TMEM53-205ENST00000372244 PRKCGP05129 697 aa20.15■□□□□ 0.82
TMEM53-205ENST00000372244 RABIFP47224 123 aa20.15■□□□□ 0.82
TMEM53-205ENST00000372244 LIG3P49916 1009 aa20.15■□□□□ 0.82
TMEM53-205ENST00000372244 PPIDQ08752 370 aaKnown RBP20.15■□□□□ 0.82
TMEM53-205ENST00000372244 BNIP3Q12983 259 aa20.15■□□□□ 0.82
TMEM53-205ENST00000372244 IHHQ14623 411 aa20.15■□□□□ 0.82
TMEM53-205ENST00000372244 GATAD2AQ86YP4 633 aa20.15■□□□□ 0.82
TMEM53-205ENST00000372244 RCOR2Q8IZ40 523 aa20.15■□□□□ 0.82
TMEM53-205ENST00000372244 CCNYQ8ND76 341 aa20.15■□□□□ 0.82
TMEM53-205ENST00000372244 ACRBPQ8NEB7 543 aa20.15■□□□□ 0.82
TMEM53-205ENST00000372244 OLFM3Q96PB7 478 aa20.15■□□□□ 0.82
TMEM53-205ENST00000372244 CDC6Q99741 560 aa20.15■□□□□ 0.82
TMEM53-205ENST00000372244 HEY1Q9Y5J3 304 aa20.15■□□□□ 0.82
TMEM53-205ENST00000372244 SPTY2D1-AS1A0A0U1RR47 76 aa20.14■□□□□ 0.81
TMEM53-205ENST00000372244 ZRANB2O95218 330 aaKnown RBP eCLIP20.14■□□□□ 0.81
TMEM53-205ENST00000372244 EPHA8P29322 1005 aaPredicted RBP20.14■□□□□ 0.81
TMEM53-205ENST00000372244 VAV2P52735 878 aa20.14■□□□□ 0.81
TMEM53-205ENST00000372244 SHC2P98077 582 aa20.14■□□□□ 0.81
TMEM53-205ENST00000372244 TRAF2Q12933 501 aa20.14■□□□□ 0.81
TMEM53-205ENST00000372244 RALGDSQ12967 914 aa20.14■□□□□ 0.81
TMEM53-205ENST00000372244 DAAM2Q86T65 1068 aa20.14■□□□□ 0.81
TMEM53-205ENST00000372244 CCDC13Q8IYE1 715 aa20.14■□□□□ 0.81
TMEM53-205ENST00000372244 CBARPQ8N350 705 aaPredicted RBP20.14■□□□□ 0.81
TMEM53-205ENST00000372244 TP53I13Q8NBR0 393 aaPredicted RBP20.14■□□□□ 0.81
TMEM53-205ENST00000372244 ARRDC2Q8TBH0 407 aa20.14■□□□□ 0.81
TMEM53-205ENST00000372244 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.14■□□□□ 0.81
TMEM53-205ENST00000372244 SEMA3CQ99985 751 aa20.14■□□□□ 0.81
TMEM53-205ENST00000372244 C1QTNF7Q9BXJ2 289 aa20.14■□□□□ 0.81
TMEM53-205ENST00000372244 POLR1EQ9GZS1 481 aaKnown RBP20.14■□□□□ 0.81
TMEM53-205ENST00000372244 MBNL1Q9NR56 388 aaKnown RBP20.14■□□□□ 0.81
TMEM53-205ENST00000372244 PPIL1Q9Y3C6 166 aa20.14■□□□□ 0.81
TMEM53-205ENST00000372244 CEP295Q9C0D2 2601 aa20.14■□□□□ 0.81
TMEM53-205ENST00000372244 ITGAVP06756 1048 aa20.13■□□□□ 0.81
TMEM53-205ENST00000372244 C6P13671 934 aa20.13■□□□□ 0.81
TMEM53-205ENST00000372244 NR2C2P49116 596 aa20.13■□□□□ 0.81
TMEM53-205ENST00000372244 SEMG2Q02383 582 aa20.13■□□□□ 0.81
TMEM53-205ENST00000372244 FZD2Q14332 565 aa20.13■□□□□ 0.81
TMEM53-205ENST00000372244 PDK1Q15118 436 aa20.13■□□□□ 0.81
TMEM53-205ENST00000372244 WSCD2Q2TBF2 565 aa20.13■□□□□ 0.81
TMEM53-205ENST00000372244 ODF2Q5BJF6 829 aa20.13■□□□□ 0.81
TMEM53-205ENST00000372244 LIPIQ6XZB0 460 aa20.13■□□□□ 0.81
TMEM53-205ENST00000372244 SPOCD1Q6ZMY3 1216 aa20.13■□□□□ 0.81
TMEM53-205ENST00000372244 DPPA4Q7L190 304 aa20.13■□□□□ 0.81
TMEM53-205ENST00000372244 RFX6Q8HWS3 928 aa20.13■□□□□ 0.81
TMEM53-205ENST00000372244 ZNF830Q96NB3 372 aaPredicted RBP20.13■□□□□ 0.81
TMEM53-205ENST00000372244 IL12RB2Q99665 862 aa20.13■□□□□ 0.81
TMEM53-205ENST00000372244 BRD8Q9H0E9 1235 aa20.13■□□□□ 0.81
TMEM53-205ENST00000372244 PHTF1Q9UMS5 762 aa20.13■□□□□ 0.81
TMEM53-205ENST00000372244 ACACBO00763 2458 aa20.13■□□□□ 0.81
TMEM53-205ENST00000372244 TOR1BO14657 336 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 FZD6O60353 706 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 PGLSO95336 258 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 JCHAINP01591 159 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 KRT10P13645 584 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 MARCKSL1P49006 195 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 YPEL5P62699 121 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 IFI35P80217 286 aaPredicted RBP20.12■□□□□ 0.81
TMEM53-205ENST00000372244 ADCY2Q08462 1091 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 TFDP2Q14188 446 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 LRRC14Q15048 493 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 NPNTQ6UXI9 565 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 PTAR1Q7Z6K3 402 aaPredicted RBP20.12■□□□□ 0.81
TMEM53-205ENST00000372244 SLC25A45Q8N413 288 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 CNTD1Q8N815 330 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 LRRC57Q8N9N7 239 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 EXD1Q8NHP7 514 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 PIH1D2Q8WWB5 315 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 KRT35Q92764 455 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 SCRN2Q96FV2 425 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 COQ6Q9Y2Z9 468 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.12■□□□□ 0.81
TMEM53-205ENST00000372244 PCDHA3Q9Y5H8 950 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 RAI2Q9Y5P3 530 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 SHROOM3Q8TF72 1996 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 CHD8Q9HCK8 2581 aa20.12■□□□□ 0.81
TMEM53-205ENST00000372244 KCNK1O00180 336 aa20.11■□□□□ 0.81
TMEM53-205ENST00000372244 DKK1O94907 266 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms