RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 CCDC124Q96CT7 223 aaKnown RBP11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 SMARCD1Q96GM5 515 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 ZNF512Q96ME7 567 aaPredicted RBP11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 BIRC8Q96P09 236 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 FERMT1Q9BQL6 677 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 COG4Q9H9E3 785 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 TMEM30AQ9NV96 361 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 HESX1Q9UBX0 185 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 AK5Q9Y6K8 562 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 DCXO43602 365 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 PFDN1O60925 122 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 BCAS2O75934 225 aaPredicted RBP11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 PGM3O95394 542 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 KCNA4P22459 653 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 SCNN1AP37088 669 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 HADHAP40939 763 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 MAGEA11P43364 429 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 TUBA4AP68366 448 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 MYBPC1Q00872 1141 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 IFRD2Q12894 506 aaPredicted RBP11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 ZNF423Q2M1K9 1284 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 MYLK3Q32MK0 819 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 CCDC14Q49A88 953 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 TCHHL1Q5QJ38 904 aaPredicted RBP11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 ARHGAP17Q68EM7 881 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 CES5AQ6NT32 575 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 C16orf46Q6P387 395 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 DHRS4L2Q6PKH6 230 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 GRASPQ7Z6J2 395 aaPredicted RBP11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 UNC5BQ8IZJ1 945 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 ELMOD1Q8N336 334 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 METTL25Q8N6Q8 603 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 CNTD1Q8N815 330 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 ZFP28Q8NHY6 868 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 SMG7Q92540 1137 aaKnown RBP11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 MSLNLQ96KJ4 702 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 SMOQ99835 787 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 DUSP16Q9BY84 665 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 PRKD2Q9BZL6 878 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 HCFC1R1Q9NWW0 138 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 UBAP1Q9NZ09 502 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 TMEM216Q9P0N5 145 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 TXNDC16Q9P2K2 825 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 RCOR3Q9P2K3 495 aaPredicted RBP11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 VTI1BQ9UEU0 232 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 CD207Q9UJ71 328 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 MAGED2Q9UNF1 606 aaPredicted RBP11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 HEY1Q9Y5J3 304 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 TSC2P49815 1807 aa11.56□□□□□ -0.56
TSPAN1-201ENST00000372003 A0A0A0MRY4 1105 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 ZSCAN9O15535 394 aaPredicted RBP11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 ZBTB14O43829 449 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 TRIM13O60858 407 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 XYLBO75191 536 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 TRMUO75648 421 aaKnown RBP11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 HSPA4LO95757 839 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 HNRNPA1P09651 372 aaKnown RBP eCLIP11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 CDK4P11802 303 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 ZNF23P17027 643 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 ME2P23368 584 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 PIK3R1P27986 724 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 TYK2P29597 1187 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 SDC4P31431 198 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 SPRP35270 261 aaPredicted RBP11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 PTPN9P43378 593 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 PSMD8P48556 350 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 ERFP50548 548 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 INHBCP55103 352 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 NTHL1P78549 312 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 TXNL4AP83876 142 aaKnown RBP11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 TFF2Q03403 129 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 PLD1Q13393 1074 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 FLOT2Q14254 428 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 VEPH1Q14D04 833 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 HEATR6Q6AI08 1181 aaKnown RBP11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 OR6B2Q6IFH4 312 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 TRNP1Q6NT89 227 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 CLEC20AQ6ZU45 233 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 RTL10Q7L3V2 364 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 DNAJB7Q7Z6W7 309 aaPredicted RBP11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 TTC30AQ86WT1 665 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 HS6ST3Q8IZP7 471 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 MPP5Q8N3R9 675 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 PHTF2Q8N3S3 785 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 ANKRD52Q8NB46 1076 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 ZMIZ2Q8NF64 920 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 SHKBP1Q8TBC3 707 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 GAB3Q8WWW8 586 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 ZNF707Q96C28 371 aaPredicted RBP11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 DUS3LQ96G46 650 aaKnown RBP11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 SPATA13Q96N96 652 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 CORO1BQ9BR76 489 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 TRIM56Q9BRZ2 755 aaKnown RBP11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 SNRNP25Q9BV90 132 aaKnown RBP11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 ILKAPQ9H0C8 392 aaPredicted RBP11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 S1PR5Q9H228 398 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 TCF7L2Q9NQB0 619 aa11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 DNMT3BQ9UBC3 853 aaKnown RBP11.55□□□□□ -0.56
TSPAN1-201ENST00000372003 A0A0J9YVX5 310 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms