RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 DEFB115Q30KQ5 88 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 IZUMO2Q6UXV1 221 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 ZYG11AQ6WRX3 759 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 OR13J1Q8NGT2 312 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 WBP2Q969T9 261 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 CMTM5Q96DZ9 223 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 C1QTNF1Q9BXJ1 281 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 MRPL46Q9H2W6 279 aaKnown RBP11.82□□□□□ -0.52
PDE6C-201ENST00000371447 FBRSL1Q9HCM7 1045 aaKnown RBP11.82□□□□□ -0.52
PDE6C-201ENST00000371447 IRAK4Q9NWZ3 460 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 NDE1Q9NXR1 346 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 CDYLQ9Y232 598 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 TRIM17Q9Y577 477 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 C2orf78A6NCI8 922 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 MAP3K7O43318 606 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 GPC4O75487 556 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 ATF6P18850 670 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 PIK3R1P27986 724 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 ADRA1AP35348 466 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 ART3Q13508 389 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 IRF5Q13568 498 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 FAM83EQ2M2I3 478 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 GRAMD1BQ3KR37 738 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 DNAL1Q4LDG9 190 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 TLDC1Q6P9B6 456 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 GK5Q6ZS86 529 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 CLEC14AQ86T13 490 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 KBTBD2Q8IY47 623 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 FBXO22Q8NEZ5 403 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 TTPALQ9BTX7 342 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 ATP13A1Q9HD20 1204 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 MARCH5Q9NX47 278 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 TMEM161AQ9NX61 479 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 VWA7Q9Y334 891 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 PDCD11Q14690 1871 aaKnown RBP11.81□□□□□ -0.52
PDE6C-201ENST00000371447 CCDC162PA2VCL2 907 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 PSMD3O43242 534 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 GALTP07902 379 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 ITGAXP20702 1163 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 VHLP40337 213 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 PFKFB4Q16877 469 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 MMEL1Q495T6 779 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 FSCBQ5H9T9 825 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 TRAF7Q6Q0C0 670 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 KDELC1Q6UW63 502 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 EPGNQ6UW88 154 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 CARNMT1Q8N4J0 409 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 OR9I1Q8NGQ6 314 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 DPF3Q92784 378 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 IMP4Q96G21 291 aaKnown RBP11.81□□□□□ -0.52
PDE6C-201ENST00000371447 SLC39A13Q96H72 371 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 PEX11BO96011 259 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 GFAPP14136 432 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 ANPEPP15144 967 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 GJA1P17302 382 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 CTPS1P17812 591 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 CDK18Q07002 472 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 NOGQ13253 232 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 PITRM1Q5JRX3 1037 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 OR4K2Q8NGD2 314 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 RAB3IL1Q8TBN0 382 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 HBEGFQ99075 208 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 TRIM8Q9BZR9 551 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 PRM3Q9NNZ6 103 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 RAP2CQ9Y3L5 183 aa11.81□□□□□ -0.52
PDE6C-201ENST00000371447 SLC38A8A6NNN8 435 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 ARVCFO00192 962 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 GRID2O43424 1007 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 CABYRO75952 493 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 MMP2P08253 660 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 AOC1P19801 751 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 PAX7P23759 505 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 HOXD10P28358 340 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 GKP32189 559 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 ATP5C1P36542 298 aaKnown RBP11.8□□□□□ -0.52
PDE6C-201ENST00000371447 CPOXP36551 454 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 HADHAP40939 763 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 ECT2LQ008S8 904 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 TRIP10Q15642 601 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 ZRSR2Q15696 482 aaKnown RBP11.8□□□□□ -0.52
PDE6C-201ENST00000371447 KLC3Q6P597 504 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 TMEM207Q6UWW9 146 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 TAS2R42Q7RTR8 314 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 DDIASQ8IXT1 998 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 LSMEM2Q8N112 164 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 TMEM151AQ8N4L1 468 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 STYXQ8WUJ0 223 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 SPDL1Q96EA4 605 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 CASD1Q96PB1 797 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 SLC39A3Q9BRY0 314 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 CINPQ9BW66 212 aaPredicted RBP11.8□□□□□ -0.52
PDE6C-201ENST00000371447 POLR1EQ9GZS1 481 aaKnown RBP11.8□□□□□ -0.52
PDE6C-201ENST00000371447 UNC93B1Q9H1C4 597 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 DLGAP2Q9P1A6 1054 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 CDH22Q9UJ99 828 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 ARHGAP26Q9UNA1 814 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 RALGAPA2Q2PPJ7 1873 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 IQCF5A8MTL0 148 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 MATN2O00339 956 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 PRRG1O14668 218 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms