RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 INVSQ9Y283 1065 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 TBC1D3DA0A087WVF3 549 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 TBC1D3IA0A087WXS9 549 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 TBC1D3EA0A087X179 549 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 TBC1D3KA0A087X1G2 549 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 LOC285095A0A1B0GVY8 99 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 TBC1D3FA6NER0 549 aaPredicted RBP15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 ERI2A8K979 691 aaKnown RBP15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 TBC1D3LB9A6J9 549 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 NEMP1O14524 444 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 RIOK3O14730 519 aaKnown RBP15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 PMPCBO75439 489 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 METTL18O95568 372 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 ECEL1O95672 775 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 PRLP01236 227 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 PDHA1P08559 390 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 TBC1D3HP0C7X1 549 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 BCKDHBP21953 392 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 ABL2P42684 1182 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 WNT3AP56704 352 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 SRSF5Q13243 272 aaKnown RBP15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 PCSK7Q16549 785 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 WHAMMP3Q1A5X7 153 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 FAM182AQ5T1J6 154 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 PMS2CLQ68D20 193 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 TBC1D3GQ6DHY5 549 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 TBC1D3CQ6IPX1 549 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 KIAA1161Q6NSJ0 714 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 KDELC1Q6UW63 502 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 ZNF572Q7Z3I7 529 aaPredicted RBP15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 TBC1D3Q8IZP1 549 aaPredicted RBP15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 SPATA4Q8NEY3 305 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 CCHCR1Q8TD31 782 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 ATOH1Q92858 354 aaPredicted RBP15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 MCCC1Q96RQ3 725 aaPredicted RBP15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 TRIB3Q96RU7 358 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 SRPK1Q96SB4 655 aaKnown RBP15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 GORASP1Q9BQQ3 440 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 DDX47Q9H0S4 455 aaKnown RBP15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 SEMA4AQ9H3S1 761 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 PCDH12Q9NPG4 1184 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 UBP1Q9NZI7 540 aa15.63■□□□□ 0.09
PRPF38B-202ENST00000370022 ANKRD66B4E2M5 251 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 C10orf142B7Z368 130 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 ZNF500O60304 480 aaPredicted RBP15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 NDST3O95803 873 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 CYP2A6P11509 494 aaPredicted RBP15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 RPL22P35268 128 aaKnown RBP15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 NUDT1P36639 197 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 PLA2G5P39877 138 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 CCR5P51681 352 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 RPS21P63220 83 aaKnown RBP15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 PLK5Q496M5 336 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 TMEM52BQ4KMG9 183 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 KIAA0895LQ68EN5 471 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 TRIM69Q86WT6 500 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 LPCAT1Q8NF37 534 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 IPMKQ8NFU5 416 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 MRGPRX2Q96LB1 330 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 R4GN57 208 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 A0A0J9YYE9 177 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 FAM47DPA6NHR8 397 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 METTL12A8MUP2 240 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 ESPNB1AK53 854 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 F5H423 210 aaPredicted RBP15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 SPINT1O43278 529 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 PCDH8O95206 1070 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 TRBC1P01850 177 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 KRT14P02533 472 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 ETS1P14921 441 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 HLA-DPA1P20036 260 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 MMP12P39900 470 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 FAM193AP78312 1265 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 SEMA5AQ13591 1074 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 SYDE1Q6ZW31 735 aaPredicted RBP15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 DPPA4Q7L190 304 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 GLIS1Q8NBF1 620 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 RMDN1Q96DB5 314 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 LYSMD1Q96S90 227 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 MLPHQ9BV36 600 aaPredicted RBP15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 C6orf106Q9H6K1 298 aaPredicted RBP15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 LRRC40Q9H9A6 602 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 RAB6BQ9NRW1 208 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 RAB23Q9ULC3 237 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 MRFAP1Q9Y605 127 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 EML5Q05BV3 1969 aa15.62■□□□□ 0.09
PRPF38B-202ENST00000370022 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 CAPN8A6NHC0 703 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 E7EVH7 732 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 LATO43561 262 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 RNGTTO60942 597 aaKnown RBP15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 AP2A1O95782 977 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 ZSCAN5DPP0CG00 497 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 NBL1P41271 181 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 DPP6P42658 865 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 DHX34Q14147 1143 aaKnown RBP15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 LRRC73Q5JTD7 316 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 WDR45BQ5MNZ6 344 aa15.61■□□□□ 0.09
PRPF38B-202ENST00000370022 SYCP2LQ5T4T6 812 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms