RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 DMC1Q14565 340 aa16.9■□□□□ 0.3
PHGDH-202ENST00000369409 PTPRCAPQ14761 206 aa16.9■□□□□ 0.3
PHGDH-202ENST00000369409 GEN1Q17RS7 908 aa16.9■□□□□ 0.3
PHGDH-202ENST00000369409 MBLAC2Q68D91 279 aa16.9■□□□□ 0.3
PHGDH-202ENST00000369409 GLT6D1Q7Z4J2 308 aa16.9■□□□□ 0.3
PHGDH-202ENST00000369409 AHI1Q8N157 1196 aa16.9■□□□□ 0.3
PHGDH-202ENST00000369409 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.9■□□□□ 0.3
PHGDH-202ENST00000369409 OR2AP1Q8NGE2 309 aa16.9■□□□□ 0.3
PHGDH-202ENST00000369409 TCP10LQ8TDR4 215 aa16.9■□□□□ 0.3
PHGDH-202ENST00000369409 MYLIPQ8WY64 445 aa16.9■□□□□ 0.3
PHGDH-202ENST00000369409 PTPRN2Q92932 1015 aa16.9■□□□□ 0.3
PHGDH-202ENST00000369409 DNAJC1Q96KC8 554 aaKnown RBP16.9■□□□□ 0.3
PHGDH-202ENST00000369409 FAM167BQ9BTA0 163 aa16.9■□□□□ 0.3
PHGDH-202ENST00000369409 EPN3Q9H201 632 aa16.9■□□□□ 0.3
PHGDH-202ENST00000369409 C12orf65Q9H3J6 166 aaKnown RBP16.9■□□□□ 0.3
PHGDH-202ENST00000369409 EBF3Q9H4W6 596 aa16.9■□□□□ 0.3
PHGDH-202ENST00000369409 PCDHB9Q9Y5E1 797 aa16.9■□□□□ 0.3
PHGDH-202ENST00000369409 SCN8AQ9UQD0 1980 aa16.9■□□□□ 0.3
PHGDH-202ENST00000369409 COPEO14579 308 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 AURKAO14965 403 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 HOXC11O43248 304 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-202ENST00000369409 BNIP3LO60238 219 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 NFATC1O95644 943 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 SLC8A1P32418 973 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 MAPK8P45983 427 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 CSNK1DP48730 415 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 NEK3P51956 506 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 PRAMEP78395 509 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 TMPRSS15P98073 1019 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 ECT2LQ008S8 904 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 PDE1BQ01064 536 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 SULT2A1Q06520 285 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 CTBP1Q13363 440 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 LAMB3Q13751 1172 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 QPCTQ16769 361 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 ACCSLQ4AC99 568 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 TMEM215Q68D42 235 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 CHRDL2Q6WN34 429 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 TIFABQ6ZNK6 161 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 KIAA0907Q7Z7F0 614 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-202ENST00000369409 C12orf40Q86WS4 652 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 CAMK1DQ8IU85 385 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 DCLK2Q8N568 766 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 OR13C4Q8NGS5 318 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 VPS39Q96JC1 886 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 MCMBPQ9BTE3 642 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 SLC17A7Q9P2U7 560 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 CDH7Q9ULB5 785 aa16.89■□□□□ 0.29
PHGDH-202ENST00000369409 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.88■□□□□ 0.29
PHGDH-202ENST00000369409 ANKRD66B4E2M5 251 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 FZD6O60353 706 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 SIN3BO75182 1162 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 TBX10O75333 385 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 ASMTLO95671 621 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 BMP1P13497 986 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 HOXB8P17481 243 aaPredicted RBP16.88■□□□□ 0.29
PHGDH-202ENST00000369409 SP100P23497 879 aaPredicted RBP16.88■□□□□ 0.29
PHGDH-202ENST00000369409 DGKGP49619 791 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 EPHB1P54762 984 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 SNRPD1P62314 119 aaKnown RBP16.88■□□□□ 0.29
PHGDH-202ENST00000369409 BCL2L1Q07817 233 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 DNAJC3Q13217 504 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 ADAM15Q13444 863 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 ARMC12Q5T9G4 340 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 TANGO2Q6ICL3 276 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 FSTL4Q6MZW2 842 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 NEPROQ6NW34 567 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 LVRNQ6Q4G3 990 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 OTUD6BQ8N6M0 293 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 MDGA1Q8NFP4 955 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 OR6P1Q8NGX9 317 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 HDAC10Q969S8 669 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 CCDC134Q9H6E4 229 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 TRPV4Q9HBA0 871 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 OBP2AQ9NY56 170 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 CLEC1BQ9P126 229 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 SLCO3A1Q9UIG8 710 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 OR51F1A6NGY5 319 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 SRRM3A6NNA2 597 aaPredicted RBP16.88■□□□□ 0.29
PHGDH-202ENST00000369409 TM9SF1O15321 606 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 TIMM44O43615 452 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 PGLSO95336 258 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 CRTAMO95727 393 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 POLR2EP19388 210 aaKnown RBP16.88■□□□□ 0.29
PHGDH-202ENST00000369409 ZNF140P52738 457 aaPredicted RBP16.88■□□□□ 0.29
PHGDH-202ENST00000369409 ACVR1Q04771 509 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 DLX2Q07687 328 aaPredicted RBP16.88■□□□□ 0.29
PHGDH-202ENST00000369409 PTPRRQ15256 657 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 SEPT7Q16181 437 aaKnown RBP16.88■□□□□ 0.29
PHGDH-202ENST00000369409 HHATQ5VTY9 493 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 VITQ6UXI7 678 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 EP400NLQ6ZTU2 488 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 CMC1Q7Z7K0 106 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 ZC3HC1Q86WB0 502 aaKnown RBP16.88■□□□□ 0.29
PHGDH-202ENST00000369409 NDUFAF2Q8N183 169 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 PAF1Q8N7H5 531 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 C2CD4AQ8NCU7 369 aaPredicted RBP16.88■□□□□ 0.29
PHGDH-202ENST00000369409 BCAS4Q8TDM0 211 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 STYXQ8WUJ0 223 aa16.88■□□□□ 0.29
PHGDH-202ENST00000369409 SORCS1Q8WY21 1168 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms