RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 SPARTQ8N0X7 666 aa16.28■□□□□ 0.2
CHD1L-203ENST00000369259 MFSD4AQ8N468 514 aa16.28■□□□□ 0.2
CHD1L-203ENST00000369259 LEMD2Q8NC56 503 aa16.28■□□□□ 0.2
CHD1L-203ENST00000369259 PDZD8Q8NEN9 1154 aa16.28■□□□□ 0.2
CHD1L-203ENST00000369259 ZNF486Q96H40 463 aaPredicted RBP16.28■□□□□ 0.2
CHD1L-203ENST00000369259 KCTD15Q96SI1 283 aaPredicted RBP16.28■□□□□ 0.2
CHD1L-203ENST00000369259 HOPXQ9BPY8 73 aaPredicted RBP16.28■□□□□ 0.2
CHD1L-203ENST00000369259 CEP44Q9C0F1 390 aa16.28■□□□□ 0.2
CHD1L-203ENST00000369259 ING2Q9H160 280 aa16.28■□□□□ 0.2
CHD1L-203ENST00000369259 DBNDD1Q9H9R9 158 aa16.28■□□□□ 0.2
CHD1L-203ENST00000369259 JPH1Q9HDC5 661 aaPredicted RBP16.28■□□□□ 0.2
CHD1L-203ENST00000369259 BFARQ9NZS9 450 aa16.28■□□□□ 0.2
CHD1L-203ENST00000369259 DKK3Q9UBP4 350 aa16.28■□□□□ 0.2
CHD1L-203ENST00000369259 ENPP5Q9UJA9 477 aa16.28■□□□□ 0.2
CHD1L-203ENST00000369259 VANGL2Q9ULK5 521 aa16.28■□□□□ 0.2
CHD1L-203ENST00000369259 TNFRSF10AO00220 468 aa16.27■□□□□ 0.2
CHD1L-203ENST00000369259 DEAF1O75398 565 aaPredicted RBP16.27■□□□□ 0.2
CHD1L-203ENST00000369259 GFAPP14136 432 aa16.27■□□□□ 0.2
CHD1L-203ENST00000369259 HNRNPLP14866 589 aaKnown RBP eCLIP16.27■□□□□ 0.24e-10■■□□□ 14.2
CHD1L-203ENST00000369259 CCND2P30279 289 aa16.27■□□□□ 0.2
CHD1L-203ENST00000369259 SERPINB1P30740 379 aa16.27■□□□□ 0.2
CHD1L-203ENST00000369259 AVPR1AP37288 418 aa16.27■□□□□ 0.2
CHD1L-203ENST00000369259 C1QTNF8P60827 252 aa16.27■□□□□ 0.2
CHD1L-203ENST00000369259 POLD3Q15054 466 aaPredicted RBP16.27■□□□□ 0.2
CHD1L-203ENST00000369259 SKIV2LQ15477 1246 aaKnown RBP16.27■□□□□ 0.2
CHD1L-203ENST00000369259 PSMD5Q16401 504 aa16.27■□□□□ 0.2
CHD1L-203ENST00000369259 PRMT9Q6P2P2 845 aa16.27■□□□□ 0.2
CHD1L-203ENST00000369259 ABHD15Q6UXT9 468 aa16.27■□□□□ 0.2
CHD1L-203ENST00000369259 AFAP1L2Q8N4X5 818 aa16.27■□□□□ 0.2
CHD1L-203ENST00000369259 Q8N9G6 341 aaPredicted RBP16.27■□□□□ 0.2
CHD1L-203ENST00000369259 LRCH3Q96II8 777 aa16.27■□□□□ 0.2
CHD1L-203ENST00000369259 OMDQ99983 421 aa16.27■□□□□ 0.2
CHD1L-203ENST00000369259 SEPT10Q9P0V9 454 aa16.27■□□□□ 0.2
CHD1L-203ENST00000369259 TOR1BO14657 336 aa16.27■□□□□ 0.19
CHD1L-203ENST00000369259 AURKAO14965 403 aa16.27■□□□□ 0.19
CHD1L-203ENST00000369259 DNAJB1P25685 340 aa16.27■□□□□ 0.19
CHD1L-203ENST00000369259 RGS7P49802 495 aa16.27■□□□□ 0.19
CHD1L-203ENST00000369259 CYP51A1Q16850 503 aa16.27■□□□□ 0.19
CHD1L-203ENST00000369259 RBM48Q5RL73 367 aaKnown RBP16.27■□□□□ 0.19
CHD1L-203ENST00000369259 SAPCD2Q86UD0 394 aa16.27■□□□□ 0.19
CHD1L-203ENST00000369259 RETREG3Q86VR2 466 aa16.27■□□□□ 0.19
CHD1L-203ENST00000369259 TXNDC15Q96J42 360 aa16.27■□□□□ 0.19
CHD1L-203ENST00000369259 OSBPL2Q9H1P3 480 aa16.27■□□□□ 0.19
CHD1L-203ENST00000369259 TP63Q9H3D4 680 aaPredicted RBP16.27■□□□□ 0.19
CHD1L-203ENST00000369259 ZNF639Q9UID6 485 aa16.27■□□□□ 0.19
CHD1L-203ENST00000369259 FZD1Q9UP38 647 aa16.27■□□□□ 0.19
CHD1L-203ENST00000369259 LRRC37AA6NMS7 1700 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 MYO18AQ92614 2054 aaKnown RBP16.26■□□□□ 0.19
CHD1L-203ENST00000369259 ILVBLA1L0T0 632 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 ARPC2O15144 300 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 POLR2EP19388 210 aaKnown RBP16.26■□□□□ 0.19
CHD1L-203ENST00000369259 CYP3A5P20815 502 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 CRHBPP24387 322 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 HTR1BP28222 390 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 SHMT2P34897 504 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 CAPSQ13938 189 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 R3HCC1LQ7Z5L2 792 aaKnown RBP16.26■□□□□ 0.19
CHD1L-203ENST00000369259 PODNQ7Z5L7 613 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 VSIG10LQ86VR7 867 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 ARMC8Q8IUR7 673 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 ZNF567Q8N184 647 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 KHSRPQ92945 711 aaKnown RBP eCLIP16.26■□□□□ 0.198e-8■■■□□ 17.5
CHD1L-203ENST00000369259 AKT1S1Q96B36 256 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 HDAC11Q96DB2 347 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 GLIS2Q9BZE0 524 aaPredicted RBP16.26■□□□□ 0.19
CHD1L-203ENST00000369259 ADNPQ9H2P0 1102 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 IL1RL2Q9HB29 575 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.26■□□□□ 0.19
CHD1L-203ENST00000369259 GTF2IRD1Q9UHL9 959 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 ZNF229Q9UJW7 825 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 C16orf96A6NNT2 1141 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 NOTOA8MTQ0 251 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 BBIP1A8MTZ0 92 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 H0Y858 1186 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 POLRMTO00411 1230 aaKnown RBP16.26■□□□□ 0.19
CHD1L-203ENST00000369259 USP12O75317 370 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 FARP2O94887 1054 aaPredicted RBP16.26■□□□□ 0.19
CHD1L-203ENST00000369259 BMP4P12644 408 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 BMPR1AP36894 532 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 IGBP1P78318 339 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 CDC20Q12834 499 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 CTF1Q16619 201 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 EML3Q32P44 896 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 XRRA1Q6P2D8 792 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 KRT27Q7Z3Y8 459 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 ZC3HC1Q86WB0 502 aaKnown RBP16.26■□□□□ 0.19
CHD1L-203ENST00000369259 FUNDC1Q8IVP5 155 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 SCML4Q8N228 414 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 ELMOD1Q8N336 334 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 ARPC5LQ9BPX5 153 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 MRPL4Q9BYD3 311 aaKnown RBP16.26■□□□□ 0.19
CHD1L-203ENST00000369259 CPNE5Q9HCH3 593 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 PCDH12Q9NPG4 1184 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 TLR9Q9NR96 1032 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 FBXO8Q9NRD0 319 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 MAP10Q9P2G4 905 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 ACOT9Q9Y305 439 aa16.26■□□□□ 0.19
CHD1L-203ENST00000369259 MAGEB16A2A368 324 aa16.25■□□□□ 0.19
CHD1L-203ENST00000369259 LDLRP01130 860 aa16.25■□□□□ 0.19
CHD1L-203ENST00000369259 NR4A2P43354 598 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms