RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 LMLNQ96KR4 655 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 C9orf72Q96LT7 481 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 QKIQ96PU8 341 aaKnown RBP eCLIP10.12□□□□□ -0.799e-9■■■■■ 42.3
TPM3-210ENST00000368530 EPAS1Q99814 870 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 TM9SF3Q9HD45 589 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 SAYSD1Q9NPB0 183 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 PRSS16Q9NQE7 514 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 NINJ2Q9NZG7 142 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 RAXQ9Y2V3 346 aa10.12□□□□□ -0.79
TPM3-210ENST00000368530 PTPRBP23467 1997 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 CFAP69A5D8W1 941 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 GOLGA6CA6NDK9 693 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 F5H423 210 aaPredicted RBP10.11□□□□□ -0.79
TPM3-210ENST00000368530 BANF1O75531 89 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 CYBBP04839 570 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 GOLGA6DP0CG33 693 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 ACADMP11310 421 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 ERCC2P18074 760 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 ACTN2P35609 894 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 NR2C2P49116 596 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 AFF3P51826 1226 aaKnown RBP10.11□□□□□ -0.79
TPM3-210ENST00000368530 RPS14P62263 151 aaKnown RBP10.11□□□□□ -0.79
TPM3-210ENST00000368530 AP1B1Q10567 949 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 MTM1Q13496 603 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 NUMA1Q14980 2115 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 MORF4L2Q15014 288 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 KYNUQ16719 465 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 KRT71Q3SY84 523 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 DNAJC21Q5F1R6 531 aaKnown RBP10.11□□□□□ -0.79
TPM3-210ENST00000368530 RWDD4Q6NW29 188 aaKnown RBP10.11□□□□□ -0.79
TPM3-210ENST00000368530 TRMT10CQ7L0Y3 403 aaKnown RBP10.11□□□□□ -0.79
TPM3-210ENST00000368530 BEND5Q7L4P6 421 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 SH2D3CQ8N5H7 860 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 WFDC5Q8TCV5 224 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 CYB5D2Q8WUJ1 264 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 TFB1MQ8WVM0 346 aaKnown RBP10.11□□□□□ -0.79
TPM3-210ENST00000368530 RBM15Q96T37 977 aaKnown RBP eCLIP10.11□□□□□ -0.79
TPM3-210ENST00000368530 LGMNQ99538 433 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 CDC6Q99741 560 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 GOLGA6AQ9NYA3 693 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 SEPT10Q9P0V9 454 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 OR12D3Q9UGF7 316 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 ANKRD6Q9Y2G4 727 aa10.11□□□□□ -0.79
TPM3-210ENST00000368530 MUC22E2RYF6 1773 aaPredicted RBP10.11□□□□□ -0.79
TPM3-210ENST00000368530 ACACAQ13085 2346 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 TLDC2A0PJX2 215 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 TRABD2BA6NFA1 517 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 PCDHGA12O60330 932 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 PAGE1O75459 146 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 TMEM63AO94886 807 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 LRIG2O94898 1065 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 IGLV3-27P01718 113 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 IGHV4-34P06331 123 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 MYZAPP0CAP1 466 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 VAV1P15498 845 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 EPHB2P29323 1055 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 CCR1P32246 355 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 CTSKP43235 329 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 MAGEA4P43358 317 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 GRIA4P48058 902 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 ZBTB16Q05516 673 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 XRCC4Q13426 336 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 FASTKD3Q14CZ7 662 aaKnown RBP10.1□□□□□ -0.79
TPM3-210ENST00000368530 E2F5Q15329 346 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 SMAD1Q15797 465 aaKnown RBP10.1□□□□□ -0.79
TPM3-210ENST00000368530 ADGRF1Q5T601 910 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 LAYNQ6UX15 382 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 CAPN12Q6ZSI9 719 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 CHST9Q7L1S5 443 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 PCGF5Q86SE9 256 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 ANKMY2Q8IV38 441 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 NAT8LQ8N9F0 302 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 CCNYQ8ND76 341 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 TMA16Q96EY4 203 aaKnown RBP10.1□□□□□ -0.79
TPM3-210ENST00000368530 SERPINB11Q96P15 392 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 OLFM3Q96PB7 478 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 CEP41Q9BYV8 373 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 TSPYL1Q9H0U9 437 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 MTG2Q9H4K7 406 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 EBF2Q9HAK2 575 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 TMBIM4Q9HC24 238 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 RAB6BQ9NRW1 208 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 ABCB8Q9NUT2 735 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 ARHGEF38Q9NXL2 777 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 PAK5Q9P286 719 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 XPO7Q9UIA9 1087 aaKnown RBP10.1□□□□□ -0.79
TPM3-210ENST00000368530 GGA2Q9UJY4 613 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 SHOC2Q9UQ13 582 aa10.1□□□□□ -0.79
TPM3-210ENST00000368530 HBS1LQ9Y450 684 aaKnown RBP10.1□□□□□ -0.79
TPM3-210ENST00000368530 CABIN1Q9Y6J0 2220 aa10.09□□□□□ -0.79
TPM3-210ENST00000368530 GCN1Q92616 2671 aaKnown RBP10.09□□□□□ -0.79
TPM3-210ENST00000368530 HACD1B0YJ81 288 aa10.09□□□□□ -0.79
TPM3-210ENST00000368530 H0Y8X5 98 aa10.09□□□□□ -0.79
TPM3-210ENST00000368530 NDC80O14777 642 aa10.09□□□□□ -0.79
TPM3-210ENST00000368530 SEMA4FO95754 770 aa10.09□□□□□ -0.79
TPM3-210ENST00000368530 LATS1O95835 1130 aa10.09□□□□□ -0.79
TPM3-210ENST00000368530 DLDP09622 509 aaKnown RBP10.09□□□□□ -0.79
TPM3-210ENST00000368530 NUDT17P0C025 328 aa10.09□□□□□ -0.79
TPM3-210ENST00000368530 PABPC1P11940 636 aaKnown RBP10.09□□□□□ -0.79
TPM3-210ENST00000368530 CD27P26842 260 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms