RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 SLC25A23Q9BV35 468 aa12.96□□□□□ -0.34
PTPRK-207ENST00000368226 FCF1Q9Y324 198 aaKnown RBP12.96□□□□□ -0.34
PTPRK-207ENST00000368226 E9PAM4 449 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 NBNO60934 754 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 FKBP6O75344 327 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 ULK1O75385 1050 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 FAM58BPP0C7Q3 252 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 IDH2P48735 452 aaKnown RBP12.95□□□□□ -0.34
PTPRK-207ENST00000368226 TAF5Q15542 800 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 CCDC185Q8N715 623 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 KLHL23Q8NBE8 558 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 IPCEF1Q8WWN9 437 aaPredicted RBP12.95□□□□□ -0.34
PTPRK-207ENST00000368226 KLF15Q9UIH9 416 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 POLR3HQ9Y535 204 aaPredicted RBP12.95□□□□□ -0.34
PTPRK-207ENST00000368226 KIF1AQ12756 1690 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 CD48P09326 243 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 ZNF37AP17032 561 aaPredicted RBP12.95□□□□□ -0.34
PTPRK-207ENST00000368226 SYN1P17600 705 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 PCBP1Q15365 356 aaKnown RBP eCLIP12.95□□□□□ -0.34
PTPRK-207ENST00000368226 ZNF557Q8N988 423 aaPredicted RBP12.95□□□□□ -0.34
PTPRK-207ENST00000368226 C1orf127Q8N9H9 656 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 MAGEE2Q8TD90 523 aaPredicted RBP12.95□□□□□ -0.34
PTPRK-207ENST00000368226 EBNA1BP2Q99848 306 aaKnown RBP12.95□□□□□ -0.34
PTPRK-207ENST00000368226 PAPOLBQ9NRJ5 636 aaKnown RBP12.95□□□□□ -0.34
PTPRK-207ENST00000368226 PDP2Q9P2J9 529 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 LAG3P18627 525 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 LMO2P25791 158 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 FUT2Q10981 343 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 INAQ16352 499 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 GPRIN3Q6ZVF9 776 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 C16orf62Q7Z3J2 963 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 OR14C36Q8NHC7 312 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 LRRC39Q96DD0 335 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 GAS2L1Q99501 681 aaPredicted RBP12.95□□□□□ -0.34
PTPRK-207ENST00000368226 ADGRB2O60241 1585 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 LRRC10BA6NIK2 292 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 FOXO6A8MYZ6 492 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 MAGEC1O60732 1142 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 COPZ1P61923 177 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 CYP4F8P98187 520 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 MBTD1Q05BQ5 628 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 FAM187BQ17R55 369 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 FNBP1LQ5T0N5 605 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 ARL14EPQ8N8R7 260 aaPredicted RBP12.95□□□□□ -0.34
PTPRK-207ENST00000368226 ALG3Q92685 438 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 RAD21L1Q9H4I0 556 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 CYLDQ9NQC7 956 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 PCYOX1Q9UHG3 505 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 MYL12BO14950 172 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 GRM6O15303 877 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 ATP5F1P24539 256 aaPredicted RBP12.95□□□□□ -0.34
PTPRK-207ENST00000368226 MAT2AP31153 395 aaKnown RBP12.95□□□□□ -0.34
PTPRK-207ENST00000368226 DSC2Q02487 901 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 MSLNQ13421 630 aaPredicted RBP12.95□□□□□ -0.34
PTPRK-207ENST00000368226 GNA13Q14344 377 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 ZNHIT3Q15649 155 aaPredicted RBP12.95□□□□□ -0.34
PTPRK-207ENST00000368226 SNX30Q5VWJ9 437 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 FAM46CQ5VWP2 391 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 FAAH2Q6GMR7 532 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 PMF1Q6P1K2 205 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 POMZP3Q6PJE2 187 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 UBE2R2Q712K3 238 aaPredicted RBP12.95□□□□□ -0.34
PTPRK-207ENST00000368226 DCBLD1Q8N8Z6 715 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 OR4K2Q8NGD2 314 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 ART4Q93070 314 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 RPL10LQ96L21 214 aaKnown RBP12.95□□□□□ -0.34
PTPRK-207ENST00000368226 ABCG4Q9H172 646 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 BATF3Q9NR55 127 aa12.95□□□□□ -0.34
PTPRK-207ENST00000368226 C2orf71A6NGG8 1288 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 ENPP3O14638 875 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 SGTAO43765 313 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 AOC2O75106 756 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 COX10Q12887 443 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 USP4Q13107 963 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 LRRC38Q5VT99 294 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 FUT10Q6P4F1 479 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 NKX2-3Q8TAU0 364 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 PCED1BQ96HM7 432 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 REEP1Q9H902 201 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 EQTNQ9NQ60 294 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 COL1A2P08123 1366 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 TCRBV9S1A1TA0A576 114 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 OR2AG2A6NM03 316 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 CACNB4O00305 520 aaPredicted RBP12.94□□□□□ -0.34
PTPRK-207ENST00000368226 CILPO75339 1184 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 C4BPAP04003 597 aaKnown RBP12.94□□□□□ -0.34
PTPRK-207ENST00000368226 BST1Q10588 318 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 BBS12Q6ZW61 710 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 NEK10Q6ZWH5 1172 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 ZNF605Q86T29 641 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 FEM1CQ96JP0 617 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 CSPG4P5Q96PW8 444 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 SERHL2Q9H4I8 314 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 SERHLQ9NQF3 203 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 RAB21Q9UL25 225 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 R3HDM2Q9Y2K5 976 aaKnown RBP12.94□□□□□ -0.34
PTPRK-207ENST00000368226 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.94□□□□□ -0.34
PTPRK-207ENST00000368226 H0YC42 278 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 OR6B1O95007 311 aa12.94□□□□□ -0.34
PTPRK-207ENST00000368226 RASGRP1O95267 797 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms