RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 BCL2L1Q07817 233 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 BNIP2Q12982 314 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 PSMD5Q16401 504 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 MTX3Q5HYI7 312 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 UBAP2Q5T6F2 1119 aaKnown RBP11.74□□□□□ -0.53
COPA-202ENST00000368069 PRRT2Q7Z6L0 340 aaPredicted RBP11.74□□□□□ -0.53
COPA-202ENST00000368069 TMEM110Q86TL2 294 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 LDB1Q86U70 411 aaPredicted RBP11.74□□□□□ -0.53
COPA-202ENST00000368069 MLPHQ9BV36 600 aaPredicted RBP11.74□□□□□ -0.53
COPA-202ENST00000368069 RBPJLQ9UBG7 517 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 TCAF1Q9Y4C2 921 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 MYH11P35749 1972 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 TTLL13PA6NNM8 815 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 EDIL3O43854 480 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 WDR47O94967 919 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 OR4Q2P0C623 313 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 CYP3A5P20815 502 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 PRDX6P30041 224 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 S100A3P33764 101 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 CHI3L1P36222 383 aaPredicted RBP11.74□□□□□ -0.53
COPA-202ENST00000368069 GLUD2P49448 558 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 SLC18A2Q05940 514 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 PLD1Q13393 1074 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 ATP1A4Q13733 1029 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 CRY1Q16526 586 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 ZC3H12BQ5HYM0 836 aaKnown RBP11.74□□□□□ -0.53
COPA-202ENST00000368069 GPRIN3Q6ZVF9 776 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 MON1AQ86VX9 555 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 HOMEZQ8IX15 550 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 UBR7Q8N806 425 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 UCMAQ8WVF2 138 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 MTFMTQ96DP5 389 aaKnown RBP11.74□□□□□ -0.53
COPA-202ENST00000368069 VPS45Q9NRW7 570 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 PNPLA3Q9NST1 481 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 POMPQ9Y244 141 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 ATP11BQ9Y2G3 1177 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 NWD2Q9ULI1 1742 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 TYROBPO43914 113 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 TIPRLO75663 272 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 KCNH1O95259 989 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 F7P08709 466 aaPredicted RBP11.74□□□□□ -0.53
COPA-202ENST00000368069 CCNCP24863 283 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 TTPAP49638 278 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 ADARP55265 1226 aaKnown RBP11.74□□□□□ -0.53
COPA-202ENST00000368069 DEFA1P59665 94 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 DEFA3P59666 94 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 MRPS15P82914 257 aaKnown RBP11.74□□□□□ -0.53
COPA-202ENST00000368069 TUSC3Q13454 348 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 OLFML1Q6UWY5 402 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 ANKS3Q6ZW76 656 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 PATL1Q86TB9 770 aaKnown RBP11.74□□□□□ -0.53
COPA-202ENST00000368069 DENND6AQ8IWF6 608 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 FSTL5Q8N475 847 aaPredicted RBP11.74□□□□□ -0.53
COPA-202ENST00000368069 MAGED4Q96JG8 741 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 HERPUD2Q9BSE4 406 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 ADAM7Q9H2U9 754 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 RIBC2Q9H4K1 309 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 HPS4Q9NQG7 708 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 TJP1Q07157 1748 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 A0A0J9YYE9 177 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 BTBD19C9JJ37 291 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 CCL22O00626 93 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 FFAR3O14843 346 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 GPR42O15529 346 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 WARSP23381 471 aaKnown RBP11.74□□□□□ -0.53
COPA-202ENST00000368069 POU1F1P28069 291 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 TUFMP49411 452 aaKnown RBP11.74□□□□□ -0.53
COPA-202ENST00000368069 PSEN1P49768 467 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 ACTR3P61158 418 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 IRF9Q00978 393 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 NOMO2Q5JPE7 1267 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 GPR158Q5T848 1215 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 DEFB128Q7Z7B8 93 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 C11orf96Q7Z7L8 435 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 LENG1Q96BZ8 264 aaPredicted RBP11.74□□□□□ -0.53
COPA-202ENST00000368069 WDR70Q9NW82 654 aa11.74□□□□□ -0.53
COPA-202ENST00000368069 NFKBIEO00221 500 aa11.73□□□□□ -0.53
COPA-202ENST00000368069 DGKAP23743 735 aa11.73□□□□□ -0.53
COPA-202ENST00000368069 CDH5P33151 784 aaPredicted RBP11.73□□□□□ -0.53
COPA-202ENST00000368069 GSSP48637 474 aa11.73□□□□□ -0.53
COPA-202ENST00000368069 CCNHP51946 323 aaPredicted RBP11.73□□□□□ -0.53
COPA-202ENST00000368069 SLC5A3P53794 718 aa11.73□□□□□ -0.53
COPA-202ENST00000368069 ATP6V0D1P61421 351 aa11.73□□□□□ -0.53
COPA-202ENST00000368069 LIN52Q52LA3 116 aa11.73□□□□□ -0.53
COPA-202ENST00000368069 SYPL2Q5VXT5 272 aa11.73□□□□□ -0.53
COPA-202ENST00000368069 DENND1CQ8IV53 801 aa11.73□□□□□ -0.53
COPA-202ENST00000368069 TMEM132CQ8N3T6 1108 aa11.73□□□□□ -0.53
COPA-202ENST00000368069 PTCD2Q8WV60 388 aaKnown RBP11.73□□□□□ -0.53
COPA-202ENST00000368069 NOL11Q9H8H0 719 aaKnown RBP11.73□□□□□ -0.53
COPA-202ENST00000368069 ARL15Q9NXU5 204 aa11.73□□□□□ -0.53
COPA-202ENST00000368069 DNMT3LQ9UJW3 386 aa11.73□□□□□ -0.53
COPA-202ENST00000368069 FBXW11Q9UKB1 542 aa11.73□□□□□ -0.53
COPA-202ENST00000368069 GNEQ9Y223 722 aaKnown RBP11.73□□□□□ -0.53
COPA-202ENST00000368069 E9PAM4 449 aa11.73□□□□□ -0.53
COPA-202ENST00000368069 FAM20BO75063 409 aa11.73□□□□□ -0.53
COPA-202ENST00000368069 KRT8P05787 483 aa11.73□□□□□ -0.53
COPA-202ENST00000368069 IDO1P14902 403 aa11.73□□□□□ -0.53
COPA-202ENST00000368069 VAV1P15498 845 aa11.73□□□□□ -0.53
COPA-202ENST00000368069 CYP2A7P20853 494 aa11.73□□□□□ -0.53
COPA-202ENST00000368069 RAP1GDS1P52306 607 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms