RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 SPC24Q8NBT2 197 aa9.39□□□□□ -0.91
MRPL55-216ENST00000366744 PCDH19Q8TAB3 1148 aa9.39□□□□□ -0.91
MRPL55-216ENST00000366744 FAF2Q96CS3 445 aa9.39□□□□□ -0.91
MRPL55-216ENST00000366744 HDAC11Q96DB2 347 aa9.39□□□□□ -0.91
MRPL55-216ENST00000366744 IFT43Q96FT9 208 aa9.39□□□□□ -0.91
MRPL55-216ENST00000366744 C1QTNF2Q9BXJ5 285 aa9.39□□□□□ -0.91
MRPL55-216ENST00000366744 NT5MQ9NPB1 228 aa9.39□□□□□ -0.91
MRPL55-216ENST00000366744 DNAJC28Q9NX36 388 aa9.39□□□□□ -0.91
MRPL55-216ENST00000366744 DNPEPQ9ULA0 475 aa9.39□□□□□ -0.91
MRPL55-216ENST00000366744 CA5BQ9Y2D0 317 aa9.39□□□□□ -0.91
MRPL55-216ENST00000366744 HS3ST3A1Q9Y663 406 aa9.39□□□□□ -0.91
MRPL55-216ENST00000366744 ARID1BQ8NFD5 2236 aaPredicted RBP9.39□□□□□ -0.91
MRPL55-216ENST00000366744 MACROD2A1Z1Q3 448 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 GOLGA8CPA6NN73 597 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 C10orf142B7Z368 130 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 RNF103O00237 685 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 RIOK3O14730 519 aaKnown RBP9.38□□□□□ -0.91
MRPL55-216ENST00000366744 WNT9AO14904 365 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 MATN3O15232 486 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 TNFSF14O43557 240 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 BUB1BO60566 1050 aaPredicted RBP9.38□□□□□ -0.91
MRPL55-216ENST00000366744 MMP20O60882 483 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 SDC3O75056 442 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 MAP3K6O95382 1288 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 CCNB1P14635 433 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 TIMP2P16035 220 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 KELP23276 732 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 CCNCP24863 283 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 RXRGP48443 463 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 ARSEP51690 589 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 GSDMDP57764 484 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 MAXP61244 160 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 HNRNPKP61978 463 aaKnown RBP eCLIP9.38□□□□□ -0.91
MRPL55-216ENST00000366744 DAB2P98082 770 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 GBE1Q04446 702 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 AP1B1Q10567 949 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 KIF5AQ12840 1032 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 ACOX1Q15067 660 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 IRF4Q15306 451 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 TMEM52BQ4KMG9 183 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 ATP13A4Q4VNC1 1196 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 DPPA4Q7L190 304 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 GATAD2AQ86YP4 633 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 CPNE8Q86YQ8 564 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 TP53INP2Q8IXH6 220 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.38□□□□□ -0.91
MRPL55-216ENST00000366744 BTN2A2Q8WVV5 523 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 RAPGEF5Q92565 580 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 FATE1Q969F0 183 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 RNF25Q96BH1 459 aaPredicted RBP9.38□□□□□ -0.91
MRPL55-216ENST00000366744 ECHDC3Q96DC8 303 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 CAMK1GQ96NX5 476 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 LENG8Q96PV6 779 aaPredicted RBP9.38□□□□□ -0.91
MRPL55-216ENST00000366744 RNF157Q96PX1 679 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 SEMA3CQ99985 751 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 BRD8Q9H0E9 1235 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 KCTD5Q9NXV2 234 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 EPN1Q9Y6I3 576 aaPredicted RBP9.38□□□□□ -0.91
MRPL55-216ENST00000366744 MYLKQ15746 1914 aa9.38□□□□□ -0.91
MRPL55-216ENST00000366744 IGF2RP11717 2491 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 SPTY2D1-AS1A0A0U1RR47 76 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 CFAP69A5D8W1 941 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 GOLGA6CA6NDK9 693 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 GOLGA6BA6NDN3 693 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 CACNB4O00305 520 aaPredicted RBP9.37□□□□□ -0.91
MRPL55-216ENST00000366744 MUSKO15146 869 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 FFAR2O15552 330 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 SPINT1O43278 529 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 MTSS1O43312 755 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 LDOC1O95751 146 aaPredicted RBP9.37□□□□□ -0.91
MRPL55-216ENST00000366744 PCCBP05166 539 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 GOLGA6DP0CG33 693 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 CDK4P11802 303 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 NME1P15531 152 aaKnown RBP9.37□□□□□ -0.91
MRPL55-216ENST00000366744 TGM2P21980 687 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 IL4RP24394 825 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 PMLP29590 882 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 VIPR1P32241 457 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 HNF1BP35680 557 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 IGFALSP35858 605 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 LIG3P49916 1009 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 BLKP51451 505 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 VAV2P52735 878 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 YPEL5P62699 121 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 SHC2P98077 582 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 PPIDQ08752 370 aaKnown RBP9.37□□□□□ -0.91
MRPL55-216ENST00000366744 TFDP3Q5H9I0 405 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 PRAMEF14Q5SWL7 426 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 DENND2CQ68D51 928 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 SLC9A4Q6AI14 798 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 MACC1Q6ZN28 852 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 GLRX5Q86SX6 157 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 GAS2L3Q86XJ1 694 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 SPATS2Q86XZ4 545 aaKnown RBP9.37□□□□□ -0.91
MRPL55-216ENST00000366744 KATNAL2Q8IYT4 538 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 SYCE1Q8N0S2 351 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 EID2Q8N6I1 236 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 PQLC3Q8N755 202 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 TPCN2Q8NHX9 752 aa9.37□□□□□ -0.91
MRPL55-216ENST00000366744 SAP25Q8TEE9 199 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms