RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 PDCD6IPQ8WUM4 868 aaKnown RBP12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 FAM131CQ96AQ9 280 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 IFT43Q96FT9 208 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 PPP1R16AQ96I34 528 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 TBL1YQ9BQ87 522 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 HINFPQ9BQA5 517 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 FICDQ9BVA6 458 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 FSD1LQ9BXM9 530 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 ADGRE3Q9BY15 652 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 HDAC8Q9BY41 377 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 SLC6A17Q9H1V8 727 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 DPH5Q9H2P9 285 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 PABPC3Q9H361 631 aaKnown RBP12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 ANKRD66B4E2M5 251 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 K7ESF4 209 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 SMAPO00193 183 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 TMEM63AO94886 807 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 APBB3O95704 486 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 DNTTP04053 509 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 RHOXF2BP0C7M4 288 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 HLA-DPA1P20036 260 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 DRD3P35462 400 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 GRIA1P42261 906 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 ITGA8P53708 1063 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 TERF1P54274 439 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 GUCY2DQ02846 1103 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 OLIG2Q13516 323 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 SLC1A5Q15758 541 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 QPCTQ16769 361 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 UGP2Q16851 508 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 POM121L1PQ3SYA9 428 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 TEX35Q5T0J7 233 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 ERN2Q76MJ5 926 aaKnown RBP12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 PARS2Q7L3T8 475 aaKnown RBP12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 AADATQ8N5Z0 425 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 HHIPQ96QV1 700 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 RHOXF2Q9BQY4 288 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 EPB41L5Q9HCM4 733 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 CASS4Q9NQ75 786 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 ITM2CQ9NQX7 267 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 GRHL1Q9NZI5 618 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 EBF1Q9UH73 591 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 ANAPC5Q9UJX4 755 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 CACNA1IQ9P0X4 2223 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 USP12O75317 370 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 CPP00450 1065 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 FGF1P05230 155 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 HOXA6P31267 233 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 P2RY2P41231 377 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 CHRNA4P43681 627 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 SUOXP51687 545 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 SARNPP82979 210 aaKnown RBP12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 CNTN1Q12860 1018 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 SFSWAPQ12872 951 aaKnown RBP12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 MSLNQ13421 630 aaPredicted RBP12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 SIRPB2Q5JXA9 342 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 CFAP58Q5T655 872 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 LRRC8BQ6P9F7 803 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 USP30Q70CQ3 517 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 ZNF534Q76KX8 674 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 TTC7BQ86TV6 843 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 HDDC3Q8N4P3 179 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 LPCAT1Q8NF37 534 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 MDGA1Q8NFP4 955 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 HMGB4Q8WW32 186 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 SCRN2Q96FV2 425 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 APOL2Q9BQE5 337 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 DYRK4Q9NR20 520 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 GDF3Q9NR23 364 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 FAM114A2Q9NRY5 505 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 SPATA6Q9NWH7 488 aaPredicted RBP12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 FBXL12Q9NXK8 326 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 SHOC2Q9UQ13 582 aa12.48□□□□□ -0.41
NIF3L1-201ENST00000359683 A0A0J9YYE9 177 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 A0A1W2PP55 124 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 ESYT3A0FGR9 886 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 UPK3BL1B0FP48 263 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 UPK3BL2E5RIL1 263 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 PLK4O00444 970 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 TRBC1P01850 177 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 MLNP12872 115 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 TNNT3P45378 269 aaPredicted RBP12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 GRIA4P48058 902 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 NEK3P51956 506 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 EPHB1P54762 984 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 CCDC15Q0P6D6 951 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 CDH17Q12864 832 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 CALCOCO2Q13137 446 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 CBLBQ13191 982 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 GALNT3Q14435 633 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 TTC31Q49AM3 519 aaPredicted RBP12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 PIP5KL1Q5T9C9 394 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 ANO7Q6IWH7 933 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 FBXL19Q6PCT2 694 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 KIAA1324Q6UXG2 1013 aaKnown RBP12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 CAND1Q86VP6 1230 aaKnown RBP12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 CACUL1Q86Y37 369 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 NDUFAF2Q8N183 169 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 SLC25A41Q8N5S1 370 aa12.47□□□□□ -0.41
NIF3L1-201ENST00000359683 OR52K1Q8NGK4 314 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms