RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 GRIA4P48058 902 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 SERPINB8P50452 374 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 SNRPD1P62314 119 aaKnown RBP13.58□□□□□ -0.24
CCDC197-201ENST00000359253 ZP2Q05996 745 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 RAD51Q06609 339 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 SEPT6Q14141 434 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 IHHQ14623 411 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 TAF1AQ15573 450 aaPredicted RBP13.58□□□□□ -0.24
CCDC197-201ENST00000359253 CNGA3Q16281 694 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 HHATQ5VTY9 493 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 ESRP1Q6NXG1 681 aaKnown RBP13.58□□□□□ -0.24
CCDC197-201ENST00000359253 KYAT3Q6YP21 454 aaKnown RBP13.58□□□□□ -0.24
CCDC197-201ENST00000359253 CCDC91Q7Z6B0 441 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 TRIM42Q8IWZ5 723 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 APCDD1Q8J025 514 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 AHI1Q8N157 1196 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 NDUFAF2Q8N183 169 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 C4orf33Q8N1A6 199 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 PCDH20Q8N6Y1 951 aaKnown RBP13.58□□□□□ -0.24
CCDC197-201ENST00000359253 ANKRD42Q8N9B4 389 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 TTC16Q8NEE8 873 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 ITFG1Q8TB96 612 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 WFDC5Q8TCV5 224 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 BPIFB1Q8TDL5 484 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 BCAS4Q8TDM0 211 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 SMARCD2Q92925 531 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 PTPRN2Q92932 1015 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 SERAC1Q96JX3 654 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 ZSWIM3Q96MP5 696 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 MCMBPQ9BTE3 642 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 MFSD1Q9H3U5 465 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 RHOJQ9H4E5 214 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 IARS2Q9NSE4 1012 aaKnown RBP13.58□□□□□ -0.24
CCDC197-201ENST00000359253 THG1LQ9NWX6 298 aaKnown RBP13.58□□□□□ -0.24
CCDC197-201ENST00000359253 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.58□□□□□ -0.24
CCDC197-201ENST00000359253 EPS15L1Q9UBC2 864 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 GGA2Q9UJY4 613 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 GRID1Q9ULK0 1009 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 CORO1CQ9ULV4 474 aaPredicted RBP13.58□□□□□ -0.24
CCDC197-201ENST00000359253 SLC8A2Q9UPR5 921 aa13.58□□□□□ -0.24
CCDC197-201ENST00000359253 SPTBN5Q9NRC6 3674 aaKnown RBP13.58□□□□□ -0.24
CCDC197-201ENST00000359253 NOTCH4Q99466 2003 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 NUP210Q8TEM1 1887 aaPredicted RBP13.57□□□□□ -0.24
CCDC197-201ENST00000359253 NEDD8-MDP1E9PL57 170 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 HOXC11O43248 304 aaPredicted RBP13.57□□□□□ -0.24
CCDC197-201ENST00000359253 LDB2O43679 373 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 FZD6O60353 706 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 SPAG7O75391 227 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 VAPBO95292 243 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 ASLP04424 464 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 PYGBP11216 843 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 HLA-FP30511 346 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 CD70P32970 193 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 RPA3P35244 121 aaPredicted RBP13.57□□□□□ -0.24
CCDC197-201ENST00000359253 NNMTP40261 264 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 MAGEA12P43365 314 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 RGRP47804 291 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 NEK3P51956 506 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 MPP2Q14168 576 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 PDGFRLQ15198 375 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 LY6G5CQ5SRR4 150 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 ARMC12Q5T9G4 340 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 MROH9Q5TGP6 573 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 NEPROQ6NW34 567 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 LINGO4Q6UY18 593 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 KDELC2Q7Z4H8 507 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 UNC5BQ8IZJ1 945 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 GJD3Q8N144 294 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 C2CD4AQ8NCU7 369 aaPredicted RBP13.57□□□□□ -0.24
CCDC197-201ENST00000359253 OR2AP1Q8NGE2 309 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 GPR150Q8NGU9 434 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 TCP10LQ8TDR4 215 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 GRAMD1AQ96CP6 724 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 RMDN1Q96DB5 314 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 ASB16Q96NS5 453 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 CPEB1Q9BZB8 566 aaKnown RBP13.57□□□□□ -0.24
CCDC197-201ENST00000359253 ATP13A3Q9H7F0 1226 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 DUS2Q9NX74 493 aaKnown RBP13.57□□□□□ -0.24
CCDC197-201ENST00000359253 PLK2Q9NYY3 685 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 INTS6Q9UL03 887 aaKnown RBP13.57□□□□□ -0.24
CCDC197-201ENST00000359253 CDH7Q9ULB5 785 aa13.57□□□□□ -0.24
CCDC197-201ENST00000359253 MIA3Q5JRA6 1907 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 HMX2A2RU54 273 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 NDUFAB1O14561 156 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 SCAMP3O14828 347 aaKnown RBP13.56□□□□□ -0.24
CCDC197-201ENST00000359253 PFDN6O15212 129 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 HTRA2O43464 458 aaPredicted RBP13.56□□□□□ -0.24
CCDC197-201ENST00000359253 UGT1A9O60656 530 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 GLRA3O75311 464 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 RPP40O75818 363 aaKnown RBP13.56□□□□□ -0.24
CCDC197-201ENST00000359253 PIAS1O75925 651 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 PRLP01236 227 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 SRPRAP08240 638 aaKnown RBP13.56□□□□□ -0.24
CCDC197-201ENST00000359253 COL6A2P12110 1019 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 LAMP2P13473 410 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 NFKBIAP25963 317 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 TYK2P29597 1187 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 PRAMEP78395 509 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 ECT2LQ008S8 904 aa13.56□□□□□ -0.24
CCDC197-201ENST00000359253 BCL2L1Q07817 233 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms