RNA–Protein interactions for RNA: ENST00000358355.5

USP20-202, Transcript of ubiquitin specific peptidase 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP20, Length 4,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP20-202ENST00000358355 TBC1D3EA0A087X179 549 aa12.96□□□□□ -0.34
USP20-202ENST00000358355 TBC1D3KA0A087X1G2 549 aa12.96□□□□□ -0.34
USP20-202ENST00000358355 TBC1D3FA6NER0 549 aaPredicted RBP12.96□□□□□ -0.34
USP20-202ENST00000358355 TBC1D3LB9A6J9 549 aa12.96□□□□□ -0.34
USP20-202ENST00000358355 BANF1O75531 89 aa12.96□□□□□ -0.34
USP20-202ENST00000358355 ABCB1P08183 1280 aaPredicted RBP12.96□□□□□ -0.34
USP20-202ENST00000358355 TBC1D3HP0C7X1 549 aa12.96□□□□□ -0.34
USP20-202ENST00000358355 CHRNB2P17787 502 aa12.96□□□□□ -0.34
USP20-202ENST00000358355 VAC14Q08AM6 782 aa12.96□□□□□ -0.34
USP20-202ENST00000358355 IRAK1BP1Q5VVH5 260 aa12.96□□□□□ -0.34
USP20-202ENST00000358355 HLA-DQA1Q5Y7H0 255 aa12.96□□□□□ -0.34
USP20-202ENST00000358355 TBC1D3GQ6DHY5 549 aa12.96□□□□□ -0.34
USP20-202ENST00000358355 TBC1D3CQ6IPX1 549 aa12.96□□□□□ -0.34
USP20-202ENST00000358355 TTC33Q6PID6 262 aaPredicted RBP12.96□□□□□ -0.34
USP20-202ENST00000358355 TRIM69Q86WT6 500 aa12.96□□□□□ -0.34
USP20-202ENST00000358355 TBC1D3Q8IZP1 549 aaPredicted RBP12.96□□□□□ -0.34
USP20-202ENST00000358355 POU5F2Q8N7G0 328 aa12.96□□□□□ -0.34
USP20-202ENST00000358355 OR52K2Q8NGK3 314 aa12.96□□□□□ -0.34
USP20-202ENST00000358355 TRPC4APQ8TEL6 797 aa12.96□□□□□ -0.34
USP20-202ENST00000358355 PTCD2Q8WV60 388 aaKnown RBP12.96□□□□□ -0.34
USP20-202ENST00000358355 CENPTQ96BT3 561 aa12.96□□□□□ -0.34
USP20-202ENST00000358355 SUSD3Q96L08 255 aa12.96□□□□□ -0.34
USP20-202ENST00000358355 QKIQ96PU8 341 aaKnown RBP eCLIP12.96□□□□□ -0.34
USP20-202ENST00000358355 SIX2Q9NPC8 291 aa12.96□□□□□ -0.34
USP20-202ENST00000358355 DUOX1Q9NRD9 1551 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 SLC38A8A6NNN8 435 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 SH3BGRLO75368 114 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 PRNPP04156 253 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 UNGP13051 313 aaPredicted RBP12.95□□□□□ -0.34
USP20-202ENST00000358355 CCL5P13501 91 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 ACADSP16219 412 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 GJA9P57773 515 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 ELP6Q0PNE2 266 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 AP1ARQ63HQ0 302 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 ZCCHC8Q6NZY4 707 aaKnown RBP12.95□□□□□ -0.34
USP20-202ENST00000358355 RPAINQ86UA6 219 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 RTL3Q8N8U3 475 aaKnown RBP12.95□□□□□ -0.34
USP20-202ENST00000358355 OR4K2Q8NGD2 314 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 ZNF398Q8TD17 642 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 PLD4Q96BZ4 506 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 YIPF3Q9GZM5 350 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 MIR1-1HGQ9H1L0 117 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 CERS4Q9HA82 394 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 XPR1Q9UBH6 696 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 EVLQ9UI08 416 aaPredicted RBP12.95□□□□□ -0.34
USP20-202ENST00000358355 SORCS3Q9UPU3 1222 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 BCORQ6W2J9 1755 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 ATP6V1B2P21281 511 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 CCT8P50990 548 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 FAM98BQ52LJ0 330 aaKnown RBP12.95□□□□□ -0.34
USP20-202ENST00000358355 CAPRIN2Q6IMN6 1127 aaKnown RBP12.95□□□□□ -0.34
USP20-202ENST00000358355 CNKSR3Q6P9H4 555 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 C16orf87Q6PH81 154 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 RDH11Q8TC12 318 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 ARNTL2Q8WYA1 636 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 MAGED4Q96JG8 741 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 ERVK-5Q9HDB9 667 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 SNX15Q9NRS6 342 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 PHPT1Q9NRX4 125 aaPredicted RBP12.95□□□□□ -0.34
USP20-202ENST00000358355 RPS6KB2Q9UBS0 482 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 ASF1AQ9Y294 204 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 SLC27A6Q9Y2P4 619 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 AP3M1Q9Y2T2 418 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 GPSM3Q9Y4H4 160 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 MYBL2P10244 700 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 KCNE1P15382 129 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 SCNN1AP37088 669 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 SLC16A1P53985 500 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 AP1S1P61966 158 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 RUNX1T1Q06455 604 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 SLC20A2Q08357 652 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 BST1Q10588 318 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 PEX6Q13608 980 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 LRRC23Q53EV4 343 aaPredicted RBP12.95□□□□□ -0.34
USP20-202ENST00000358355 SAMD4BQ5PRF9 694 aaKnown RBP12.95□□□□□ -0.34
USP20-202ENST00000358355 CDCA2Q69YH5 1023 aaPredicted RBP12.95□□□□□ -0.34
USP20-202ENST00000358355 CNSTQ6PJW8 725 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 TMEM132CQ8N3T6 1108 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 OR7D4Q8NG98 312 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 SPPL2AQ8TCT8 520 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 ZNF516Q92618 1163 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 RIPOR3Q96MK2 946 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 CCT7Q99832 543 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 SAR1AQ9NR31 198 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 BATF3Q9NR55 127 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 ATAD3AQ9NVI7 634 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 FBXW11Q9UKB1 542 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 MATN3O15232 486 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 HDAC3O15379 428 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 PIAS1O75925 651 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 AP2A1O95782 977 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 GSTM1P09488 218 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 ME2P23368 584 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 CLK1P49759 484 aaKnown RBP12.95□□□□□ -0.34
USP20-202ENST00000358355 NDST2P52849 883 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 TXNDC11Q6PKC3 985 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 ZNF621Q6ZSS3 439 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 CCDC185Q8N715 623 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 ATG16L2Q8NAA4 619 aa12.95□□□□□ -0.34
USP20-202ENST00000358355 MS4A4AQ96JQ5 239 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms