RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 EID3Q8N140 333 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 PHTF2Q8N3S3 785 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 CPA6Q8N4T0 437 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 RNF148Q8N7C7 305 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 CMASQ8NFW8 434 aaPredicted RBP9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 OR6F1Q8NGZ6 308 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 DCAKDQ8WVC6 231 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 POMGNT1Q8WZA1 660 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 REXO5Q96IC2 774 aaKnown RBP9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 DHRS4Q9BTZ2 278 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 SLC4A5Q9BY07 1137 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 IL23AQ9NPF7 189 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 PKD2L2Q9NZM6 624 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 PTBP2Q9UKA9 531 aaKnown RBP9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 H0YJX3 145 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 RNF103O00237 685 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 BMP4P12644 408 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 MX2P20592 715 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 HOXC8P31273 242 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 SFNP31947 248 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 LEPRP48357 1165 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 BEX3Q00994 111 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 TRPC3Q13507 836 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 BFSP2Q13515 415 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 ZNF697Q5TEC3 545 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 NIPA1Q7RTP0 329 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 LGI2Q8N0V4 545 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 PDPRQ8NCN5 879 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 OR13F1Q8NGS4 319 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 PIK3R3Q92569 461 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 TFAP2CQ92754 450 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 ZFYVE19Q96K21 471 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 SENP7Q9BQF6 1050 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 CHID1Q9BWS9 393 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 SLC13A1Q9BZW2 595 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 FAM49AQ9H0Q0 323 aaPredicted RBP9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 RAD21L1Q9H4I0 556 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 CPNE5Q9HCH3 593 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 DCAF16Q9NXF7 216 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 PRKAG2Q9UGJ0 569 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 A8MUA0 341 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 PI15O43692 258 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 CALUO43852 315 aaPredicted RBP9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 STBD1O95210 358 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 EDN1P05305 212 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 ACAT1P24752 427 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 KLRC2P26717 231 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 PIK3R1P27986 724 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 EEF1DP29692 281 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 SOX5P35711 763 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 CENPAP49450 140 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 TMBIM6P55061 237 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 MRPS15P82914 257 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 SELPLGQ14242 412 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 DUSP28Q4G0W2 176 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 DCUN1D2Q6PH85 259 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 LINC00518Q8N0U6 118 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 TCAIMQ8N3R3 496 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 DEFB123Q8N688 67 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 BPIFB6Q8NFQ5 453 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 OR2T34Q8NGX1 318 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 LHFPL5Q8TAF8 219 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 GLT1D1Q96MS3 346 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 FAM213AQ9BRX8 229 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 PI4K2AQ9BTU6 479 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 APOL6Q9BWW8 343 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 WDR12Q9GZL7 423 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 GPR88Q9GZN0 384 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 TOR4AQ9NXH8 423 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 TMEM216Q9P0N5 145 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 GCNT4Q9P109 453 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 ACTR3BQ9P1U1 418 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 IP6K2Q9UHH9 426 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 SORCS3Q9UPU3 1222 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 CAB39Q9Y376 341 aaPredicted RBP9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 I3L4J1 428 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 PITPNM1O00562 1244 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 CLIC3O95833 236 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 VTNP04004 478 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 KRT8P05787 483 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 ZSCAN5DPP0CG00 497 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 ALAS2P22557 587 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 TLE2Q04725 743 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 CETN1Q12798 172 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 HERC3Q15034 1050 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 PON2Q15165 354 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 RAB30Q15771 203 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 CHI3L2Q15782 390 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 KIAA1841Q6NSI8 718 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 C16orf46Q6P387 395 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 FAM171BQ6P995 826 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 POLNQ7Z5Q5 900 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 GATAD2AQ86YP4 633 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 GALNT12Q8IXK2 581 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 PHOSPHO2Q8TCD6 241 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 SEPT1Q8WYJ6 367 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 LRTOMTQ8WZ04 291 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 KAT5Q92993 513 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 TRIM63Q969Q1 353 aa9.37□□□□□ -0.91
SMARCAL1-202ENST00000358207 ATP6V1E2Q96A05 226 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms