RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 HIPK3Q9H422 1215 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 ALG9Q9H6U8 611 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 COLEC10Q9Y6Z7 277 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 PDE5AO76074 875 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 IDSP22304 550 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 AMPD1P23109 780 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 ELK3P41970 407 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 RPS6KA3P51812 740 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 ZCWPW2Q504Y3 356 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 ZFP1Q6P2D0 407 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 RASSF6Q6ZTQ3 369 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 ADAMTSL2Q86TH1 951 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 IRF2BP1Q8IU81 584 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 GALNT13Q8IUC8 556 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 FLCNQ8NFG4 579 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 OR4A15Q8NGL6 344 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 PPP1R14BQ96C90 147 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 ULBP1Q9BZM6 244 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 DSN1Q9H410 356 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 TMEM134Q9H6X4 195 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 SMURF2Q9HAU4 748 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 CFAP97Q9P2B7 532 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 MTRRQ9UBK8 725 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 AGO1Q9UL18 857 aaKnown RBP5.57□□□□□ -1.52
PTPRD-202ENST00000356435 SPEF2Q9C093 1822 aa5.57□□□□□ -1.52
PTPRD-202ENST00000356435 APOC4-APOC2K7ER74 178 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 INPP4BO15327 924 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 KHDRBS3O75525 346 aaKnown RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 OTCP00480 354 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 APOC2P02655 101 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 KCNA5P22460 613 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 PRKAG1P54619 331 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 CDCA2Q69YH5 1023 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 DEF8Q6ZN54 512 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 MTMR9Q96QG7 549 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 RNPEPQ9H4A4 650 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 ARHGAP20Q9P2F6 1191 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 A0A087X0B3 334 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 WNT10BO00744 389 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 TRUB2O95900 331 aaKnown RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 ERBB2P04626 1255 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 SELPP16109 830 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 HOXB6P17509 224 aaKnown RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 PTPN4P29074 926 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 CCL23P55773 120 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 STXBP1P61764 594 aaKnown RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 ABRQ12979 859 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 ZC3H12AQ5D1E8 599 aaKnown RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 MAP4K3Q8IVH8 894 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 POLMQ9NP87 494 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 TRPS1Q9UHF7 1281 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 TMEM59LQ9UK28 342 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 CASZ1Q86V15 1759 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 DCCP43146 1447 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 DNALI1O14645 258 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 GNSP15586 552 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 TAS2R50P59544 299 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 SMAD3P84022 425 aaKnown RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 TOP3AQ13472 1001 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 GRB14Q14449 540 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 INTS5Q6P9B9 1019 aaKnown RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 KYAT3Q6YP21 454 aaKnown RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 AMIGO1Q86WK6 493 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 DEPDC4Q8N2C3 294 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 GDPD5Q8WTR4 605 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 SMG7Q92540 1137 aaKnown RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 ZFRQ96KR1 1074 aaKnown RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 PTPRHQ9HD43 1115 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 SLC35C2Q9NQQ7 365 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 DNAJC11Q9NVH1 559 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 CRNNQ9UBG3 495 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 COPS7AQ9UBW8 275 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 BCL9LQ86UU0 1499 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 FCHO1O14526 889 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 ATG13O75143 517 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 ATP5F1P24539 256 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 SHMT1P34896 483 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 CAPN13Q6MZZ7 669 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 CHSY3Q70JA7 882 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 PARGQ86W56 976 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 C17orf64Q86WR6 236 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 RAVER1Q8IY67 606 aaKnown RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 OFCC1Q8IZS5 231 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 TESCQ96BS2 214 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 TEKT5Q96M29 485 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 RASSF1Q9NS23 344 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 DLGAP2Q9P1A6 1054 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 PCDHA11Q9Y5I1 949 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 HEBP2Q9Y5Z4 205 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 A0A0A0MRY4 1105 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 CHADO15335 359 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 IDH3BO43837 385 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 ULK1O75385 1050 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 SLC25A14O95258 325 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 CXCL14O95715 111 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 PRNPP04156 253 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 ATP4AP20648 1035 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 PPIBP23284 216 aaKnown RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 ADSLP30566 484 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms