RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 PSMA8Q8TAA3 256 aa17.33■□□□□ 0.37
COL27A1-201ENST00000356083 C17orf75Q9HAS0 396 aa17.33■□□□□ 0.37
COL27A1-201ENST00000356083 L1RE1Q9UN81 338 aa17.33■□□□□ 0.37
COL27A1-201ENST00000356083 LACTBL1A8MY62 500 aa17.33■□□□□ 0.37
COL27A1-201ENST00000356083 PDE2AO00408 941 aaPredicted RBP17.33■□□□□ 0.37
COL27A1-201ENST00000356083 PSMD8P48556 350 aa17.33■□□□□ 0.37
COL27A1-201ENST00000356083 CBX2Q14781 532 aaPredicted RBP17.33■□□□□ 0.37
COL27A1-201ENST00000356083 PTGES3Q15185 160 aaKnown RBP17.33■□□□□ 0.37
COL27A1-201ENST00000356083 ZNF280BQ86YH2 543 aa17.33■□□□□ 0.37
COL27A1-201ENST00000356083 OR7A2PQ8NGA2 310 aa17.33■□□□□ 0.37
COL27A1-201ENST00000356083 CPNE1Q99829 537 aa17.33■□□□□ 0.37
COL27A1-201ENST00000356083 C9orf16Q9BUW7 83 aa17.33■□□□□ 0.37
COL27A1-201ENST00000356083 MRPL9Q9BYD2 267 aaKnown RBP17.33■□□□□ 0.37
COL27A1-201ENST00000356083 TMPRSS4Q9NRS4 437 aa17.33■□□□□ 0.37
COL27A1-201ENST00000356083 RHPN2P1A8MT19 583 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 MAXP61244 160 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 PSMD5Q16401 504 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 SDHAF4Q5VUM1 108 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 CENPSQ8N2Z9 138 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 MRTO4Q9UKD2 239 aaKnown RBP17.33■□□□□ 0.36
COL27A1-201ENST00000356083 SYNMO15061 1565 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 CCNOP22674 350 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 RPS12P25398 132 aaKnown RBP17.33■□□□□ 0.36
COL27A1-201ENST00000356083 SLC26A3P40879 764 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 POC5Q8NA72 575 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 DCLRE1BQ9H816 532 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 PLK2Q9NYY3 685 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 SPATA6LQ8N4H0 392 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 HTR3CQ8WXA8 447 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 SSR3Q9UNL2 185 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 MED31Q9Y3C7 131 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 GAKO14976 1311 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 ATP7BP35670 1465 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 MRASO14807 208 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 NR2C2P49116 596 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 DNASE1L3Q13609 305 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 IL18Q14116 193 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 USP49Q70CQ1 688 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 FBXO15Q8NCQ5 510 aaPredicted RBP17.33■□□□□ 0.36
COL27A1-201ENST00000356083 ATP8B4Q8TF62 1192 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 TESCQ96BS2 214 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 SLC38A3Q99624 504 aa17.33■□□□□ 0.36
COL27A1-201ENST00000356083 TMEM150BA6NC51 233 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 MAT2AP31153 395 aaKnown RBP17.32■□□□□ 0.36
COL27A1-201ENST00000356083 UBE2R2Q712K3 238 aaPredicted RBP17.32■□□□□ 0.36
COL27A1-201ENST00000356083 ART5Q96L15 291 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 Q96MT0 163 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 IQCF5A8MTL0 148 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 IRGCQ6NXR0 463 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 STK40Q8N2I9 435 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 HELQQ8TDG4 1101 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 UBE2E3Q969T4 207 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 ZNF285Q96NJ3 590 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 AIF1LQ9BQI0 150 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 AARSD1Q9BTE6 412 aaKnown RBP17.32■□□□□ 0.36
COL27A1-201ENST00000356083 DCLK3Q9C098 648 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 SMURF1Q9HCE7 757 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 COPS7AQ9UBW8 275 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 RGS17Q9UGC6 210 aaPredicted RBP17.32■□□□□ 0.36
COL27A1-201ENST00000356083 MYRFQ9Y2G1 1151 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 GRIP1Q9Y3R0 1128 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 RECQL4O94761 1208 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 VIPP01282 170 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 FTH1P02794 183 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 CYP11B2P19099 503 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 ME2P23368 584 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 ELK3P41970 407 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 TARBP2Q15633 366 aaKnown RBP17.32■□□□□ 0.36
COL27A1-201ENST00000356083 PITRM1Q5JRX3 1037 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 C12orf56Q8IXR9 622 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 ACTL9Q8TC94 416 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 ELAC1Q9H777 363 aaKnown RBP17.32■□□□□ 0.36
COL27A1-201ENST00000356083 CCDC163A0A0D9SF12 145 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 PROCP04070 461 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 CAP2P40123 477 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 HECTD3Q5T447 861 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 SULT1C3Q6IMI6 304 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 SLC26A11Q86WA9 606 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 GTPBP2Q9BX10 602 aaKnown RBP17.32■□□□□ 0.36
COL27A1-201ENST00000356083 TBC1D30Q9Y2I9 924 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 MYH13Q9UKX3 1938 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 SIN3BO75182 1162 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 ADRM1Q16186 407 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 BEND4Q6ZU67 534 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 COL23A1Q86Y22 540 aaPredicted RBP17.32■□□□□ 0.36
COL27A1-201ENST00000356083 OR8D1Q8WZ84 308 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 PANX1Q96RD7 426 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 TMEM216Q9P0N5 145 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 NUP50Q9UKX7 468 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 MED24O75448 989 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 FAM228BP0C875 321 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 ADCYAP1R1P41586 468 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 ACVR2BQ13705 512 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 QPRTQ15274 297 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 RASGRP3Q8IV61 690 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 ZNF607Q96SK3 696 aa17.32■□□□□ 0.36
COL27A1-201ENST00000356083 TRAPPC6AO75865 159 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 RECQL5O94762 991 aaPredicted RBP17.31■□□□□ 0.36
COL27A1-201ENST00000356083 IFNGP01579 166 aa17.31■□□□□ 0.36
COL27A1-201ENST00000356083 SCNN1GP51170 649 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms