RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 FAM45AQ8TCE6 357 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 CCDC167Q9P0B6 97 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 HAS3O00219 553 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 MRASO14807 208 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 IRAK2O43187 625 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 CSPG5O95196 566 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 CLCN5P51795 746 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 LDLRAD1Q5T700 205 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 NPLOC4Q8TAT6 608 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 FAM81AQ8TBF8 368 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 RTP3Q9BQQ7 232 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 SLC25A23Q9BV35 468 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 TMEM181Q9P2C4 612 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 HSFX1Q9UBD0 423 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 IPO11Q9UI26 975 aaKnown RBP24.68■■□□□ 1.54
CPNE1-202ENST00000352393 TRPA1O75762 1119 aa24.67■■□□□ 1.54
CPNE1-202ENST00000352393 HTR7P34969 479 aa24.67■■□□□ 1.54
CPNE1-202ENST00000352393 MTX3Q5HYI7 312 aa24.67■■□□□ 1.54
CPNE1-202ENST00000352393 IRAK1BP1Q5VVH5 260 aa24.67■■□□□ 1.54
CPNE1-202ENST00000352393 HERC6Q8IVU3 1022 aa24.67■■□□□ 1.54
CPNE1-202ENST00000352393 ATXN3LQ9H3M9 355 aa24.67■■□□□ 1.54
CPNE1-202ENST00000352393 GSTO2Q9H4Y5 243 aa24.67■■□□□ 1.54
CPNE1-202ENST00000352393 RBM22Q9NW64 420 aaKnown RBP eCLIP24.67■■□□□ 1.549e-7■■□□□ 12.8
CPNE1-202ENST00000352393 CNOT6Q9ULM6 557 aaKnown RBP24.67■■□□□ 1.54
CPNE1-202ENST00000352393 CEPT1Q9Y6K0 416 aa24.67■■□□□ 1.54
CPNE1-202ENST00000352393 ARHGEF37A1IGU5 675 aa24.67■■□□□ 1.54
CPNE1-202ENST00000352393 SRP72O76094 671 aaKnown RBP24.67■■□□□ 1.54
CPNE1-202ENST00000352393 RBP1P09455 135 aa24.67■■□□□ 1.54
CPNE1-202ENST00000352393 PCSK1P29120 753 aa24.67■■□□□ 1.54
CPNE1-202ENST00000352393 LEPRP48357 1165 aaKnown RBP24.67■■□□□ 1.54
CPNE1-202ENST00000352393 HMBOX1Q6NT76 420 aa24.67■■□□□ 1.54
CPNE1-202ENST00000352393 CYHR1Q6ZMK1 362 aa24.67■■□□□ 1.54
CPNE1-202ENST00000352393 UBXN10Q96LJ8 280 aa24.67■■□□□ 1.54
CPNE1-202ENST00000352393 CATSPERBQ9H7T0 1116 aa24.67■■□□□ 1.54
CPNE1-202ENST00000352393 NDFIP2Q9NV92 336 aa24.67■■□□□ 1.54
CPNE1-202ENST00000352393 TBC1D13Q9NVG8 400 aa24.67■■□□□ 1.54
CPNE1-202ENST00000352393 PTPRDP23468 1912 aa24.66■■□□□ 1.54
CPNE1-202ENST00000352393 ZNF23P17027 643 aa24.66■■□□□ 1.54
CPNE1-202ENST00000352393 FGFR3P22607 806 aa24.66■■□□□ 1.54
CPNE1-202ENST00000352393 SLC5A2P31639 672 aa24.66■■□□□ 1.54
CPNE1-202ENST00000352393 ATP4BP51164 291 aa24.66■■□□□ 1.54
CPNE1-202ENST00000352393 AFF1P51825 1210 aaKnown RBP24.66■■□□□ 1.54
CPNE1-202ENST00000352393 PLK1P53350 603 aa24.66■■□□□ 1.54
CPNE1-202ENST00000352393 SAMD4BQ5PRF9 694 aaKnown RBP24.66■■□□□ 1.54
CPNE1-202ENST00000352393 BRMS1LQ5PSV4 323 aa24.66■■□□□ 1.54
CPNE1-202ENST00000352393 AFMIDQ63HM1 303 aa24.66■■□□□ 1.54
CPNE1-202ENST00000352393 KLC3Q6P597 504 aa24.66■■□□□ 1.54
CPNE1-202ENST00000352393 BEND5Q7L4P6 421 aa24.66■■□□□ 1.54
CPNE1-202ENST00000352393 RNF135Q8IUD6 432 aa24.66■■□□□ 1.54
CPNE1-202ENST00000352393 TSPAN14Q8NG11 270 aa24.66■■□□□ 1.54
CPNE1-202ENST00000352393 HAUS8Q9BT25 410 aa24.66■■□□□ 1.54
CPNE1-202ENST00000352393 SLC45A1Q9Y2W3 748 aa24.66■■□□□ 1.54
CPNE1-202ENST00000352393 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-202ENST00000352393 PAGE1O75459 146 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 CCDC166P0CW27 439 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 CDH2P19022 906 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-202ENST00000352393 NOMO2Q5JPE7 1267 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 TIGD7Q6NT04 549 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-202ENST00000352393 KDELC1Q6UW63 502 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 SLC22A9Q8IVM8 553 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 CALML6Q8TD86 181 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 TSPAN17Q96FV3 270 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 RANBP9Q96S59 729 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 THEGQ9P2T0 379 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 CROTQ9UKG9 612 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 SNX13Q9Y5W8 968 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 UBFD1O14562 309 aaKnown RBP24.65■■□□□ 1.54
CPNE1-202ENST00000352393 NRP2O60462 931 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 WISP3O95389 354 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-202ENST00000352393 PCSK6P29122 969 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 ACAP2Q15057 778 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 KDELC2Q7Z4H8 507 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 SNX31Q8N9S9 440 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 PBXIP1Q96AQ6 731 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 GAD1Q99259 594 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 SLC29A1Q99808 456 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 TRMOQ9BU70 441 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 TRIM62Q9BVG3 475 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 DDX18Q9NVP1 670 aaKnown RBP24.65■■□□□ 1.54
CPNE1-202ENST00000352393 TRAF6Q9Y4K3 522 aa24.65■■□□□ 1.54
CPNE1-202ENST00000352393 GPC4O75487 556 aa24.64■■□□□ 1.54
CPNE1-202ENST00000352393 H6PDO95479 791 aa24.64■■□□□ 1.54
CPNE1-202ENST00000352393 EPHX2P34913 555 aa24.64■■□□□ 1.54
CPNE1-202ENST00000352393 ACADVLP49748 655 aa24.64■■□□□ 1.54
CPNE1-202ENST00000352393 WNT3AP56704 352 aa24.64■■□□□ 1.54
CPNE1-202ENST00000352393 CYTH1Q15438 398 aa24.64■■□□□ 1.54
CPNE1-202ENST00000352393 CYP2R1Q6VVX0 501 aa24.64■■□□□ 1.54
CPNE1-202ENST00000352393 LARP4Q71RC2 724 aaKnown RBP eCLIP24.64■■□□□ 1.548e-24■□□□□ 9.5
CPNE1-202ENST00000352393 TLK2Q86UE8 772 aa24.64■■□□□ 1.54
CPNE1-202ENST00000352393 OR9I1Q8NGQ6 314 aa24.64■■□□□ 1.54
CPNE1-202ENST00000352393 ANKRD49Q8WVL7 239 aa24.64■■□□□ 1.54
CPNE1-202ENST00000352393 ARNT2Q9HBZ2 717 aa24.64■■□□□ 1.54
CPNE1-202ENST00000352393 ATP13A1Q9HD20 1204 aa24.64■■□□□ 1.54
CPNE1-202ENST00000352393 FAM155AB1AL88 458 aaPredicted RBP24.64■■□□□ 1.53
CPNE1-202ENST00000352393 THP07101 528 aa24.64■■□□□ 1.53
CPNE1-202ENST00000352393 BDNFP23560 247 aa24.64■■□□□ 1.53
CPNE1-202ENST00000352393 YWHAQP27348 245 aa24.64■■□□□ 1.53
CPNE1-202ENST00000352393 ALDH3B2P48448 385 aa24.64■■□□□ 1.53
CPNE1-202ENST00000352393 HECTD2Q5U5R9 776 aa24.64■■□□□ 1.53
CPNE1-202ENST00000352393 GALNT7Q86SF2 657 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms