RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 CDH18Q13634 790 aa13.53□□□□□ -0.24
UBA3-201ENST00000349511 ARHGAP15Q53QZ3 475 aa13.53□□□□□ -0.24
UBA3-201ENST00000349511 TREML1Q86YW5 311 aa13.53□□□□□ -0.24
UBA3-201ENST00000349511 MFN1Q8IWA4 741 aa13.53□□□□□ -0.24
UBA3-201ENST00000349511 SLC25A41Q8N5S1 370 aa13.53□□□□□ -0.24
UBA3-201ENST00000349511 LRRC39Q96DD0 335 aa13.53□□□□□ -0.24
UBA3-201ENST00000349511 LINC00597Q9H2U6 94 aa13.53□□□□□ -0.24
UBA3-201ENST00000349511 TASP1Q9H6P5 420 aa13.53□□□□□ -0.24
UBA3-201ENST00000349511 TDP1Q9NUW8 608 aa13.53□□□□□ -0.24
UBA3-201ENST00000349511 PCMTD2Q9NV79 361 aa13.53□□□□□ -0.24
UBA3-201ENST00000349511 SLC17A6Q9P2U8 582 aa13.53□□□□□ -0.24
UBA3-201ENST00000349511 MRPS23Q9Y3D9 190 aaKnown RBP13.53□□□□□ -0.24
UBA3-201ENST00000349511 ILVBLA1L0T0 632 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 HMX2A2RU54 273 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 TYW5A2RUC4 315 aaKnown RBP13.52□□□□□ -0.24
UBA3-201ENST00000349511 B2RBV5 119 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 CACNG3O60359 315 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 KRT38O76015 456 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 ENO1P06733 434 aaKnown RBP13.52□□□□□ -0.24
UBA3-201ENST00000349511 HNRNPA1P09651 372 aaKnown RBP eCLIP13.52□□□□□ -0.24
UBA3-201ENST00000349511 KITP10721 976 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 CSKP41240 450 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 ZNF235Q14590 738 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 PRSS36Q5K4E3 855 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 PDE12Q6L8Q7 609 aaKnown RBP13.52□□□□□ -0.24
UBA3-201ENST00000349511 CHST9Q7L1S5 443 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 HJURPQ8NCD3 748 aaPredicted RBP13.52□□□□□ -0.24
UBA3-201ENST00000349511 GSDMBQ8TAX9 411 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 DTX3LQ8TDB6 740 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 MTBPQ96DY7 904 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 FSD1LQ9BXM9 530 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 LRRC40Q9H9A6 602 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 PDFQ9HBH1 243 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 VPS28Q9UK41 221 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 ARHGAP26Q9UNA1 814 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 TBC1D30Q9Y2I9 924 aa13.52□□□□□ -0.24
UBA3-201ENST00000349511 AAR2Q9Y312 384 aaKnown RBP13.52□□□□□ -0.24
UBA3-201ENST00000349511 DPPA5A6NC42 116 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 FAM159BA6NKW6 160 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 TBX10O75333 385 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 ZNF189O75820 626 aaPredicted RBP13.52□□□□□ -0.25
UBA3-201ENST00000349511 F7P08709 466 aaPredicted RBP13.52□□□□□ -0.25
UBA3-201ENST00000349511 MLNP12872 115 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 HOXA9P31269 272 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 MRPS35P82673 323 aaKnown RBP13.52□□□□□ -0.25
UBA3-201ENST00000349511 THOC5Q13769 683 aaKnown RBP13.52□□□□□ -0.25
UBA3-201ENST00000349511 DUSP6Q16828 381 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 MROH9Q5TGP6 573 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 LRRC74BQ6ZQY2 392 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 SETD3Q86TU7 594 aaPredicted RBP13.52□□□□□ -0.25
UBA3-201ENST00000349511 TMPRSS6Q8IU80 811 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 APCDD1Q8J025 514 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 NDUFAF2Q8N183 169 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 SCG3Q8WXD2 468 aaKnown RBP13.52□□□□□ -0.25
UBA3-201ENST00000349511 STMN2Q93045 179 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 MRGPRX2Q96LB1 330 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 ZNF778Q96MU6 729 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 SEMA3CQ99985 751 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 TBL1YQ9BQ87 522 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 C20orf27Q9GZN8 174 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 SLC24A3Q9HC58 644 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 CASS4Q9NQ75 786 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 CHRAC1Q9NRG0 131 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 ZDHHC7Q9NXF8 308 aa13.52□□□□□ -0.25
UBA3-201ENST00000349511 MARCOQ9UEW3 520 aaPredicted RBP13.52□□□□□ -0.25
UBA3-201ENST00000349511 LINC01565O15544 149 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 KDELR3O43731 214 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 MAGEC1O60732 1142 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 ANXA9O76027 345 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 LATS1O95835 1130 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 BPGMP07738 259 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 MMP2P08253 660 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 CRHR1P34998 444 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 RGRP47804 291 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 RAP1GDS1P52306 607 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 AQP5P55064 265 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 ARF5P84085 180 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 POU6F1Q14863 301 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 RARS2Q5T160 578 aaKnown RBP13.51□□□□□ -0.25
UBA3-201ENST00000349511 TMCO4Q5TGY1 634 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 TMEM25Q86YD3 366 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 CRLF3Q8IUI8 442 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 ARHGAP24Q8N264 748 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 TEX26Q8N6G2 289 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 FBXO27Q8NI29 283 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 MFSD3Q96ES6 412 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 FAM161BQ96MY7 647 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 FEM1AQ9BSK4 669 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 WWP1Q9H0M0 922 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 SLC25A51Q9H1U9 297 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 BFARQ9NZS9 450 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 UBA2Q9UBT2 640 aaPredicted RBP13.51□□□□□ -0.25
UBA3-201ENST00000349511 RPS6KL1Q9Y6S9 549 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.51□□□□□ -0.25
UBA3-201ENST00000349511 MIA3Q5JRA6 1907 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 C2orf16Q68DN1 1984 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 HELZP42694 1942 aaKnown RBP13.51□□□□□ -0.25
UBA3-201ENST00000349511 ERI2A8K979 691 aaKnown RBP13.51□□□□□ -0.25
UBA3-201ENST00000349511 GFRA2O00451 464 aa13.51□□□□□ -0.25
UBA3-201ENST00000349511 SNNO75324 88 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms