RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 ZNF667Q5HYK9 610 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 HS3ST5Q8IZT8 346 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 VPS39Q96JC1 886 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 GDAP2Q9NXN4 497 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 PSME2Q9UL46 239 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 PCDHGA8Q9Y5G5 932 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 ASNA1O43681 348 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 DAB1O75553 588 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 INMTO95050 263 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 KRT8P05787 483 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 LCP1P13796 627 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 PSMB9P28065 219 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 DAB2P98082 770 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 PRKAA1Q13131 559 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 FAM83EQ2M2I3 478 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 PLA2G4EQ3MJ16 856 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 RABL3Q5HYI8 236 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 R3HCC1LQ7Z5L2 792 aaKnown RBP15.25■□□□□ 0.03
PTBP1-201ENST00000349038 ZNF280CQ8ND82 737 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 OR2T34Q8NGX1 318 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 OR2T3Q8NH03 318 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 CLEC4CQ8WTT0 213 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 LPAR1Q92633 364 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 RTP4Q96DX8 246 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 FUNDC2Q9BWH2 189 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 TRIT1Q9H3H1 467 aaKnown RBP15.25■□□□□ 0.03
PTBP1-201ENST00000349038 POMKQ9H5K3 350 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 PARVBQ9HBI1 364 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.25■□□□□ 0.039e-17■■■■□ 26.4
PTBP1-201ENST00000349038 GINS2Q9Y248 185 aa15.25■□□□□ 0.03
PTBP1-201ENST00000349038 SNAP91O60641 907 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 IL18RAPO95256 599 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 MAGEA6P43360 314 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 ASPAP45381 313 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 APLP1P51693 650 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 PLA2G16P53816 162 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 STX1BP61266 288 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 AQP6Q13520 282 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 LAPTM5Q13571 262 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 DUOXA2Q1HG44 320 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 USP41Q3LFD5 358 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 ARL13BQ3SXY8 428 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.24■□□□□ 0.034e-8■■■□□ 15.6
PTBP1-201ENST00000349038 SMG8Q8ND04 991 aaKnown RBP15.24■□□□□ 0.03
PTBP1-201ENST00000349038 FLAD1Q8NFF5 587 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 HTR3CQ8WXA8 447 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 UNC93B1Q9H1C4 597 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 GGA3Q9NZ52 723 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 PGAP2Q9UHJ9 254 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 CAB39Q9Y376 341 aaPredicted RBP15.24■□□□□ 0.03
PTBP1-201ENST00000349038 UGT2A1Q9Y4X1 527 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 TIMM22Q9Y584 194 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 H3BMM5 538 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 BCAS1O75363 584 aaPredicted RBP15.24■□□□□ 0.03
PTBP1-201ENST00000349038 CNTN2Q02246 1040 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 BAATQ14032 418 aaPredicted RBP15.24■□□□□ 0.03
PTBP1-201ENST00000349038 CDKL3Q8IVW4 592 aaPredicted RBP15.24■□□□□ 0.03
PTBP1-201ENST00000349038 DENND6AQ8IWF6 608 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 OR10Q1Q8NGQ4 319 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 SLC16A10Q8TF71 515 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 VPS33AQ96AX1 596 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 TMEM74Q96NL1 305 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 ARPC5LQ9BPX5 153 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 BEX2Q9BXY8 128 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 TRPV5Q9NQA5 729 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 ZSCAN5BA6NJL1 495 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 SOBPA7XYQ1 873 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 GNGT2O14610 69 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 AXIN1O15169 862 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 IDH3BO43837 385 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 SUPT7LO94864 414 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 SNRPB2P08579 225 aaKnown RBP15.24■□□□□ 0.03
PTBP1-201ENST00000349038 ALOX12P18054 663 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 AGXTP21549 392 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 IL4RP24394 825 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 RPS9P46781 194 aaKnown RBP15.24■□□□□ 0.03
PTBP1-201ENST00000349038 CAMK2BQ13554 666 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 LRP8Q14114 963 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 FAM209AQ5JX71 171 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 SMYD5Q6GMV2 418 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 TBPL2Q6SJ96 375 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 CYP4V2Q6ZWL3 525 aaPredicted RBP15.24■□□□□ 0.03
PTBP1-201ENST00000349038 RALGPS2Q86X27 583 aaPredicted RBP15.24■□□□□ 0.03
PTBP1-201ENST00000349038 TMEM192Q8IY95 271 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 OR7A2PQ8NGA2 310 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 NDNFQ8TB73 568 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 COQ7Q99807 217 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 REXO4Q9GZR2 422 aaKnown RBP15.24■□□□□ 0.03
PTBP1-201ENST00000349038 TMEM134Q9H6X4 195 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 SNX5Q9Y5X3 404 aa15.24■□□□□ 0.03
PTBP1-201ENST00000349038 CITO14578 2027 aa15.23■□□□□ 0.03
PTBP1-201ENST00000349038 XPNPEP2O43895 674 aa15.23■□□□□ 0.03
PTBP1-201ENST00000349038 KPNA6O60684 536 aa15.23■□□□□ 0.03
PTBP1-201ENST00000349038 ITGB3P05106 788 aa15.23■□□□□ 0.03
PTBP1-201ENST00000349038 CYP3A5P20815 502 aa15.23■□□□□ 0.03
PTBP1-201ENST00000349038 FMO4P31512 558 aa15.23■□□□□ 0.03
PTBP1-201ENST00000349038 C1QTNF8P60827 252 aa15.23■□□□□ 0.03
PTBP1-201ENST00000349038 INPP5AQ14642 412 aa15.23■□□□□ 0.03
PTBP1-201ENST00000349038 PPP4R4Q6NUP7 873 aa15.23■□□□□ 0.03
PTBP1-201ENST00000349038 CNSTQ6PJW8 725 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms