RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 C1GALT1C1Q96EU7 318 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 ZSWIM1Q9BR11 485 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 POMKQ9H5K3 350 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 MAN2B2Q9Y2E5 1009 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 ZC3H11AO75152 810 aaKnown RBP eCLIP17.71■□□□□ 0.43
SMAD4-201ENST00000342988 XYLBO75191 536 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 SLC16A8O95907 504 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 METP08581 1390 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 NR1I3Q14994 352 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 RETSATQ6NUM9 610 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 RBM4BQ9BQ04 359 aaKnown RBP17.71■□□□□ 0.43
SMAD4-201ENST00000342988 RBM4Q9BWF3 364 aaKnown RBP17.71■□□□□ 0.43
SMAD4-201ENST00000342988 MUC13Q9H3R2 512 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 CYP11B1P15538 503 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 ADNP2Q6IQ32 1131 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 TMBIM4Q9HC24 238 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 SSX4O60224 188 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 CXorf57Q6NSI4 855 aaKnown RBP17.71■□□□□ 0.43
SMAD4-201ENST00000342988 PCDHA3Q9Y5H8 950 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 CDK12Q9NYV4 1490 aaPredicted RBP17.71■□□□□ 0.43
SMAD4-201ENST00000342988 CSN2P05814 226 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 HTR1BP28222 390 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 CLCA4Q14CN2 919 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 FBXO30Q8TB52 745 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 REEP2Q9BRK0 252 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 NKIRAS2Q9NYR9 191 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 HACD1B0YJ81 288 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 C19orf81C9J6K1 198 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 DCXO43602 365 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 NPTX2P47972 431 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 CDH13P55290 713 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 GRIN2DO15399 1336 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 OR3A3P47888 321 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 OR3A2P47893 321 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 MYL6P60660 151 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 GNASQ5JWF2 1037 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 MTFMTQ96DP5 389 aaKnown RBP17.7■□□□□ 0.42
SMAD4-201ENST00000342988 ADAM17P78536 824 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 MCL1Q07820 350 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 FBXL19Q6PCT2 694 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 REXO1L1PQ8IX06 675 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 PCDH9Q9HC56 1237 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 GRHL1Q9NZI5 618 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 KANSL3Q9P2N6 904 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 ATXN2Q99700 1313 aaKnown RBP17.7■□□□□ 0.42
SMAD4-201ENST00000342988 PITPNM1O00562 1244 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 LZTR1Q8N653 840 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 STAG3L4Q8TBR4 150 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 GIMAP5Q96F15 307 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 DIRAS2Q96HU8 199 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 KLHL15Q96M94 604 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 TBL1YQ9BQ87 522 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 TMEM121BQ9BXQ6 578 aaPredicted RBP17.7■□□□□ 0.42
SMAD4-201ENST00000342988 PCDH10Q9P2E7 1040 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 PGRP06401 933 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 TTPAP49638 278 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 AP2S1P53680 142 aaPredicted RBP17.7■□□□□ 0.42
SMAD4-201ENST00000342988 MAPK10P53779 464 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 ADGRG6Q86SQ4 1221 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 OR52K1Q8NGK4 314 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 HTRA1Q92743 480 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 ATP4AP20648 1035 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 MTM1Q13496 603 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 CRTC3Q6UUV7 619 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 TTC7BQ86TV6 843 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 SPATA7Q9P0W8 599 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 MTRRQ9UBK8 725 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 CATP04040 527 aaKnown RBP17.7■□□□□ 0.42
SMAD4-201ENST00000342988 EFEMP1Q12805 493 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 LARS2Q15031 903 aaKnown RBP17.7■□□□□ 0.42
SMAD4-201ENST00000342988 MIB1Q86YT6 1006 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 ACTRT1Q8TDG2 376 aa17.7■□□□□ 0.42
SMAD4-201ENST00000342988 DDX20Q9UHI6 824 aaKnown RBP17.7■□□□□ 0.42
SMAD4-201ENST00000342988 PRKAB2O43741 272 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 PDYNP01213 254 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 RPL5P46777 297 aaKnown RBP17.69■□□□□ 0.42
SMAD4-201ENST00000342988 BCL2L1Q07817 233 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 SEMA4DQ92854 862 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 MAT2BQ9NZL9 334 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 ATP10AO60312 1499 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 THP07101 528 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 GNAO1P09471 354 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 PGAM2P15259 253 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 FMO4P31512 558 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 RAB39AQ14964 217 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 SPDYCQ5MJ68 293 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 IQSEC1Q6DN90 963 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 PTF1AQ7RTS3 328 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 COLGALT1Q8NBJ5 622 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 IL1RAPQ9NPH3 570 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 ATP7BP35670 1465 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 PDE2AO00408 941 aaPredicted RBP17.69■□□□□ 0.42
SMAD4-201ENST00000342988 TMEM62Q0P6H9 643 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 STOML3Q8TAV4 291 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 PMM1Q92871 262 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 KCNN3Q9UGI6 736 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 SHROOM3Q8TF72 1996 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 KCNJ1P48048 391 aa17.69■□□□□ 0.42
SMAD4-201ENST00000342988 ELAVL2Q12926 359 aaKnown RBP17.69■□□□□ 0.42
SMAD4-201ENST00000342988 SNX33Q8WV41 574 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms