RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 PCDHB9Q9Y5E1 797 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 ZCWPW2A0A1B0GU75 182 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 FOXO6A8MYZ6 492 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 FAM155BO75949 473 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 KRT37O76014 449 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 CRTAMO95727 393 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 SERPINA4P29622 427 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 GDI1P31150 447 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 SLC6A11P48066 632 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 TRAF2Q12933 501 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 NAB1Q13506 487 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 RUNX3Q13761 415 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 THOC5Q13769 683 aaKnown RBP17.46■□□□□ 0.39
CLDN4-201ENST00000340958 RASA2Q15283 850 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 HSP90AA5PQ58FG0 334 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 ARMC3Q5W041 872 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 ESRP1Q6NXG1 681 aaKnown RBP17.46■□□□□ 0.39
CLDN4-201ENST00000340958 ZNF449Q6P9G9 518 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 MTSS1LQ765P7 747 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 EXOC3L1Q86VI1 746 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 CAMK1DQ8IU85 385 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 PCDH20Q8N6Y1 951 aaKnown RBP17.46■□□□□ 0.39
CLDN4-201ENST00000340958 GABPB2Q8TAK5 448 aaPredicted RBP17.46■□□□□ 0.39
CLDN4-201ENST00000340958 SORCS1Q8WY21 1168 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 ISG20Q96AZ6 181 aaKnown RBP17.46■□□□□ 0.39
CLDN4-201ENST00000340958 TRIB3Q96RU7 358 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 RANBP9Q96S59 729 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 SMC6Q96SB8 1091 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 TRMT61BQ9BVS5 477 aaKnown RBP17.46■□□□□ 0.39
CLDN4-201ENST00000340958 PHF7Q9BWX1 381 aaPredicted RBP17.46■□□□□ 0.39
CLDN4-201ENST00000340958 PLA2G2FQ9BZM2 168 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 CD320Q9NPF0 282 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 IARS2Q9NSE4 1012 aaKnown RBP17.46■□□□□ 0.39
CLDN4-201ENST00000340958 FBXO10Q9UK96 956 aa17.46■□□□□ 0.39
CLDN4-201ENST00000340958 GOLGA8TH3BQL2 631 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 KRT38O76015 456 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 VAPBO95292 243 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 PIGNO95427 931 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 SLC4A1P02730 911 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 MT-ND3P03897 115 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 ASLP04424 464 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 PRKCGP05129 697 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 PDHA1P08559 390 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 CISD3P0C7P0 127 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 CSNK1DP48730 415 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 CNGA3Q16281 694 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 CARD16Q5EG05 197 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 TMEM215Q68D42 235 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 GLT6D1Q7Z4J2 308 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 OTUD6BQ8N6M0 293 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 BRSK1Q8TDC3 778 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 FGF14Q92915 247 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 MYO19Q96H55 970 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 HPS4Q9NQG7 708 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 GTSE1Q9NYZ3 720 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 SLC2A6Q9UGQ3 507 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 ZNF180Q9UJW8 692 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 MIA3Q5JRA6 1907 aa17.45■□□□□ 0.38
CLDN4-201ENST00000340958 OTOL1A6NHN0 477 aaPredicted RBP17.44■□□□□ 0.38
CLDN4-201ENST00000340958 UGT1A9O60656 530 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 GSRP00390 522 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 DLDP09622 509 aaKnown RBP17.44■□□□□ 0.38
CLDN4-201ENST00000340958 GKP32189 559 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 SERPINB9P50453 376 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 FRG1Q14331 258 aaKnown RBP17.44■□□□□ 0.38
CLDN4-201ENST00000340958 MYLK3Q32MK0 819 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 TSTD2Q5T7W7 516 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 KDM7AQ6ZMT4 941 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 KIAA0907Q7Z7F0 614 aaPredicted RBP17.44■□□□□ 0.38
CLDN4-201ENST00000340958 NSMCE3Q96MG7 304 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 TRABDQ9H4I3 376 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 ZDHHC6Q9H6R6 413 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 UGT1A7Q9HAW7 530 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 UGT1A10Q9HAW8 530 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 UGT1A8Q9HAW9 530 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 EURLQ9NYK6 297 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 SENP1Q9P0U3 644 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 SLC17A6Q9P2U8 582 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 ADAM21Q9UKJ8 722 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 SLC27A6Q9Y2P4 619 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 DOCK8Q8NF50 2099 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 TRIOO75962 3097 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 TBC1D3BA6NDS4 549 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 C2orf81A6NN90 581 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 ANKRD66B4E2M5 251 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 ECI2O75521 394 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 BRAFP15056 766 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 SLC8A1P32418 973 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 PRAMEP78395 509 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 TMPRSS15P98073 1019 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 TNFAIP8L3Q5GJ75 292 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 Q6ZVU0 165 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 MARK2Q7KZI7 788 aaKnown RBP17.44■□□□□ 0.38
CLDN4-201ENST00000340958 STRA8Q7Z7C7 330 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 TRABD2AQ86V40 505 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 OR6P1Q8NGX9 317 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 CNOT10Q9H9A5 744 aaKnown RBP17.44■□□□□ 0.38
CLDN4-201ENST00000340958 ELOVL2Q9NXB9 296 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 ARL5AQ9Y689 179 aa17.44■□□□□ 0.38
CLDN4-201ENST00000340958 C19orf67A6NJJ6 358 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms