RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 MYOCQ99972 504 aa15.53■□□□□ 0.08
VAPA-201ENST00000340541 ATP13A3Q9H7F0 1226 aa15.53■□□□□ 0.08
VAPA-201ENST00000340541 DDX56Q9NY93 547 aaKnown RBP15.53■□□□□ 0.08
VAPA-201ENST00000340541 GPSM3Q9Y4H4 160 aa15.53■□□□□ 0.08
VAPA-201ENST00000340541 PTPRBP23467 1997 aa15.53■□□□□ 0.08
VAPA-201ENST00000340541 CACNA1GO43497 2377 aa15.53■□□□□ 0.08
VAPA-201ENST00000340541 ZFYVE26Q68DK2 2539 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 IGLON5A6NGN9 336 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 MATN3O15232 486 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 RAD51BO15315 384 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 YKT6O15498 198 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 TNNT1P13805 278 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 HNRNPA2B1P22626 353 aaKnown RBP15.52■□□□□ 0.08
VAPA-201ENST00000340541 CCNCP24863 283 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 SERPINA4P29622 427 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 CDKN2BP42772 138 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 MMP13P45452 471 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 SUOXP51687 545 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 MAXP61244 160 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 STAT4Q14765 748 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 SHBQ15464 509 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 IFI16Q16666 785 aaKnown RBP15.52■□□□□ 0.08
VAPA-201ENST00000340541 PRAMEF14Q5SWL7 426 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 MARC1Q5VT66 337 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 BRAT1Q6PJG6 821 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 ZSCAN30Q86W11 494 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 ASB12Q8WXK4 309 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 SPOCK2Q92563 424 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 HDAC11Q96DB2 347 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 NOD2Q9HC29 1040 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 PCDH12Q9NPG4 1184 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 BTBD3Q9Y2F9 522 aa15.52■□□□□ 0.08
VAPA-201ENST00000340541 A0A0U1RQJ8 604 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 A0A1B0GTQ1 180 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 NEMP1O14524 444 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 RIOK3O14730 519 aaKnown RBP15.51■□□□□ 0.07
VAPA-201ENST00000340541 HTRA2O43464 458 aaPredicted RBP15.51■□□□□ 0.07
VAPA-201ENST00000340541 MMP20O60882 483 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 IPO7O95373 1038 aaKnown RBP15.51■□□□□ 0.07
VAPA-201ENST00000340541 PAK4O96013 591 aaPredicted RBP15.51■□□□□ 0.07
VAPA-201ENST00000340541 PRKCGP05129 697 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 C1SP09871 688 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 MX2P20592 715 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 CLDN2P57739 230 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 BCL2L1Q07817 233 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 OVGP1Q12889 678 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 IHHQ14623 411 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 SMAD1Q15797 465 aaKnown RBP15.51■□□□□ 0.07
VAPA-201ENST00000340541 TMEM52BQ4KMG9 183 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 SLC45A4Q5BKX6 768 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 ALG1LQ6GMV1 187 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 ABI3BPQ7Z7G0 1075 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 KATNAL2Q8IYT4 538 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 NSMCE1Q8WV22 266 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 KRT35Q92764 455 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 BMFQ96LC9 184 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 OLFM3Q96PB7 478 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 LENG8Q96PV6 779 aaPredicted RBP15.51■□□□□ 0.07
VAPA-201ENST00000340541 ELF4Q99607 663 aaPredicted RBP15.51■□□□□ 0.07
VAPA-201ENST00000340541 DESI2Q9BSY9 194 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 ERVMER34-1Q9H9K5 563 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 GPR27Q9NS67 375 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 ATRXP46100 2492 aa15.51■□□□□ 0.07
VAPA-201ENST00000340541 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.5■□□□□ 0.07
VAPA-201ENST00000340541 APOL1O14791 398 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 SOCS5O75159 536 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 AKT2P31751 481 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 MMP12P39900 470 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 ADCY2Q08462 1091 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 PPIDQ08752 370 aaKnown RBP15.5■□□□□ 0.07
VAPA-201ENST00000340541 ELP6Q0PNE2 266 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 TRAF2Q12933 501 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 RALGPS1Q5JS13 557 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 TIGD7Q6NT04 549 aaPredicted RBP15.5■□□□□ 0.07
VAPA-201ENST00000340541 NPNTQ6UXI9 565 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 SPOCD1Q6ZMY3 1216 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 DAAM2Q86T65 1068 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 SLC22A18ASQ8N1D0 253 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 BBS5Q8N3I7 341 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 PDCD7Q8N8D1 485 aaKnown RBP15.5■□□□□ 0.07
VAPA-201ENST00000340541 LRRC57Q8N9N7 239 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 OR13H1Q8NG92 308 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 CENPTQ96BT3 561 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 KLHDC7BQ96G42 594 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 CALR3Q96L12 384 aaKnown RBP15.5■□□□□ 0.07
VAPA-201ENST00000340541 LGMNQ99538 433 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 WRAP53Q9BUR4 548 aaKnown RBP15.5■□□□□ 0.07
VAPA-201ENST00000340541 NT5MQ9NPB1 228 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 SCUBE2Q9NQ36 999 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 GDF3Q9NR23 364 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 ATP8A1Q9Y2Q0 1164 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 PCDHGC4Q9Y5F7 938 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 PCDHGA1Q9Y5H4 931 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 HEY1Q9Y5J3 304 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 HS3ST3A1Q9Y663 406 aa15.5■□□□□ 0.07
VAPA-201ENST00000340541 NBEAQ8NFP9 2946 aa15.49■□□□□ 0.07
VAPA-201ENST00000340541 POM121BA6NF01 834 aa15.49■□□□□ 0.07
VAPA-201ENST00000340541 HLA-DQB2P05538 268 aa15.49■□□□□ 0.07
VAPA-201ENST00000340541 THEGLP0DJG4 465 aa15.49■□□□□ 0.07
VAPA-201ENST00000340541 KRT10P13645 584 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms