RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 EPHX4Q8IUS5 362 aa12.04□□□□□ -0.48
CCDC144CP-201ENST00000340196 CBR4Q8N4T8 237 aa12.04□□□□□ -0.48
CCDC144CP-201ENST00000340196 NT5C3BQ969T7 300 aa12.04□□□□□ -0.48
CCDC144CP-201ENST00000340196 RMND5BQ96G75 393 aaPredicted RBP12.04□□□□□ -0.48
CCDC144CP-201ENST00000340196 TEKT5Q96M29 485 aa12.04□□□□□ -0.48
CCDC144CP-201ENST00000340196 KCNA7Q96RP8 456 aa12.04□□□□□ -0.48
CCDC144CP-201ENST00000340196 MFRPQ9BY79 579 aa12.04□□□□□ -0.48
CCDC144CP-201ENST00000340196 DUSP16Q9BY84 665 aa12.04□□□□□ -0.48
CCDC144CP-201ENST00000340196 SMOXQ9NWM0 555 aa12.04□□□□□ -0.48
CCDC144CP-201ENST00000340196 USP22Q9UPT9 525 aa12.04□□□□□ -0.48
CCDC144CP-201ENST00000340196 ZNF711Q9Y462 761 aa12.04□□□□□ -0.48
CCDC144CP-201ENST00000340196 HEATR9A2RTY3 570 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 MYBPHLA2RUH7 354 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 A8MT66 165 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 H3BNH8 94 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 UBDO15205 165 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 STAMBPO95630 424 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 ZNF23P17027 643 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 LRPAP1P30533 357 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 CSE1LP55060 971 aaKnown RBP12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 RHDQ02161 417 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 CDH17Q12864 832 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 SLC27A1Q6PCB7 646 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 POTEHQ6S545 545 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 CUZD1Q86UP6 607 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 IFNEQ86WN2 208 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 EXOC8Q8IYI6 725 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 NAT16Q8N8M0 369 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 CRTAC1Q9NQ79 661 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 STAP1Q9ULZ2 295 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 DOLKQ9UPQ8 538 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 MYLKQ15746 1914 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 A0A1B0GTL3 188 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 ASB14A6NK59 587 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 PIRO00625 290 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 TRIM24O15164 1050 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 ALDOCP09972 364 aaKnown RBP12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 MTHFD1P11586 935 aaKnown RBP12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 SLC26A2P50443 739 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 LILRA4P59901 499 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 PRKCQQ04759 706 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 SEMA3BQ13214 749 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 USP41Q3LFD5 358 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 SLC44A4Q53GD3 710 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 CCDC92Q53HC0 331 aaPredicted RBP12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 BTBD8Q5XKL5 378 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 TAPT1Q6NXT6 567 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 KLC3Q6P597 504 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 RYBPQ8N488 228 aaPredicted RBP12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 ZMIZ2Q8NF64 920 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 HSFY1Q96LI6 401 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 RANBP9Q96S59 729 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 PTPN18Q99952 460 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 VPS28Q9UK41 221 aa12.03□□□□□ -0.48
CCDC144CP-201ENST00000340196 NR5A2O00482 541 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 DLGAP1O14490 977 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 HUS1O60921 280 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 TOMM70O94826 608 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 SIX3O95343 332 aaPredicted RBP12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 HOXD12P35452 270 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 ARCN1P48444 511 aaKnown RBP12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 PGFP49763 221 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 FOXA1P55317 472 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 MAXP61244 160 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 RPL26P61254 145 aaKnown RBP12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 PTPRCAPQ14761 206 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 ZNF792Q3KQV3 632 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 VPS26BQ4G0F5 336 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 DENND5AQ6IQ26 1287 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 ELMSAN1Q6PJG2 1045 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 ZNF467Q7Z7K2 595 aaPredicted RBP12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 FUNDC1Q8IVP5 155 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 CATSPER1Q8NEC5 780 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 DLG3Q92796 817 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 RNF34Q969K3 372 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 SMOQ99835 787 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 MRPL46Q9H2W6 279 aaKnown RBP12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 IGSF5Q9NSI5 407 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 NCKIPSDQ9NZQ3 722 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 RCOR3Q9P2K3 495 aaPredicted RBP12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 EVLQ9UI08 416 aaPredicted RBP12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 MYRFQ9Y2G1 1151 aa12.02□□□□□ -0.48
CCDC144CP-201ENST00000340196 MSI1O43347 362 aaKnown RBP12.02□□□□□ -0.49
CCDC144CP-201ENST00000340196 B4GAT1O43505 415 aa12.02□□□□□ -0.49
CCDC144CP-201ENST00000340196 GJB3O75712 270 aa12.02□□□□□ -0.49
CCDC144CP-201ENST00000340196 ATE1O95260 518 aa12.02□□□□□ -0.49
CCDC144CP-201ENST00000340196 SLC4A1P02730 911 aa12.02□□□□□ -0.49
CCDC144CP-201ENST00000340196 NCK1P16333 377 aa12.02□□□□□ -0.49
CCDC144CP-201ENST00000340196 ACADSBP45954 432 aa12.02□□□□□ -0.49
CCDC144CP-201ENST00000340196 RPL34P49207 117 aaKnown RBP12.02□□□□□ -0.49
CCDC144CP-201ENST00000340196 SNX16P57768 344 aa12.02□□□□□ -0.49
CCDC144CP-201ENST00000340196 KCTD21Q4G0X4 260 aa12.02□□□□□ -0.49
CCDC144CP-201ENST00000340196 XKR5Q6UX68 686 aa12.02□□□□□ -0.49
CCDC144CP-201ENST00000340196 CCDC80Q76M96 950 aa12.02□□□□□ -0.49
CCDC144CP-201ENST00000340196 LRRC52Q8N7C0 313 aa12.02□□□□□ -0.49
CCDC144CP-201ENST00000340196 EMID1Q96A84 441 aaPredicted RBP12.02□□□□□ -0.49
CCDC144CP-201ENST00000340196 MAELQ96JY0 434 aaKnown RBP12.02□□□□□ -0.49
CCDC144CP-201ENST00000340196 COLEC11Q9BWP8 271 aa12.02□□□□□ -0.49
CCDC144CP-201ENST00000340196 UNC93B1Q9H1C4 597 aa12.02□□□□□ -0.49
CCDC144CP-201ENST00000340196 ALG9Q9H6U8 611 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms