RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 TMC3Q7Z5M5 1100 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 FAM47BQ8NA70 645 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 IRF2BPLQ9H1B7 796 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 KCNN2Q9H2S1 579 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 AP4B1Q9Y6B7 739 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 THOC2Q8NI27 1593 aaKnown RBP12.9□□□□□ -0.34
USP47-202ENST00000339865 C2orf74A8MZ97 194 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 CSH1P0DML2 217 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 CSH2P0DML3 217 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 RRM1P23921 792 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 C1QBPQ07021 282 aaKnown RBP12.9□□□□□ -0.34
USP47-202ENST00000339865 CAVIN3Q969G5 261 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 CATSPERZQ9NTU4 200 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 TOP2BQ02880 1626 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 SCAMP1O15126 338 aa12.9□□□□□ -0.35
USP47-202ENST00000339865 SCN2BO60939 215 aa12.9□□□□□ -0.35
USP47-202ENST00000339865 LDOC1O95751 146 aaPredicted RBP12.9□□□□□ -0.35
USP47-202ENST00000339865 TSPAN8P19075 237 aa12.9□□□□□ -0.35
USP47-202ENST00000339865 RPA1P27694 616 aa12.9□□□□□ -0.35
USP47-202ENST00000339865 CCR1P32246 355 aa12.9□□□□□ -0.35
USP47-202ENST00000339865 TAF6P49848 677 aa12.9□□□□□ -0.35
USP47-202ENST00000339865 FCGRTP55899 365 aa12.9□□□□□ -0.35
USP47-202ENST00000339865 CES5AQ6NT32 575 aa12.9□□□□□ -0.35
USP47-202ENST00000339865 GPR156Q8NFN8 814 aa12.9□□□□□ -0.35
USP47-202ENST00000339865 DENND4BO75064 1496 aaPredicted RBP12.9□□□□□ -0.35
USP47-202ENST00000339865 PLB1Q6P1J6 1458 aa12.9□□□□□ -0.35
USP47-202ENST00000339865 L7N2F9 121 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 IFNA7P01567 189 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 VAMP2P63027 116 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 FSTL1Q12841 308 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 PPM1LQ5SGD2 360 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 POMZP3Q6PJE2 187 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 FAM126AQ9BYI3 521 aaPredicted RBP12.89□□□□□ -0.35
USP47-202ENST00000339865 ZCCHC2Q9C0B9 1178 aaKnown RBP12.89□□□□□ -0.35
USP47-202ENST00000339865 OR6C70A6NIJ9 312 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 MAGEB2O15479 319 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 DDX3YO15523 660 aaKnown RBP12.89□□□□□ -0.35
USP47-202ENST00000339865 IPO13O94829 963 aaKnown RBP12.89□□□□□ -0.35
USP47-202ENST00000339865 TCEA1P23193 301 aaKnown RBP12.89□□□□□ -0.35
USP47-202ENST00000339865 IL6STP40189 918 aaPredicted RBP12.89□□□□□ -0.35
USP47-202ENST00000339865 RAP1GAPP47736 663 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 UAP1L1Q3KQV9 507 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 HERC6Q8IVU3 1022 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 ABCG8Q9H221 673 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 MOV10Q9HCE1 1003 aaKnown RBP12.89□□□□□ -0.35
USP47-202ENST00000339865 INTS7Q9NVH2 962 aaKnown RBP12.89□□□□□ -0.35
USP47-202ENST00000339865 CNOT6Q9ULM6 557 aaKnown RBP12.89□□□□□ -0.35
USP47-202ENST00000339865 CYP11B1P15538 503 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 ITPKBP27987 946 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 C6orf52Q5T4I8 152 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 CNSTQ6PJW8 725 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 ZNF730Q6ZMV8 503 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 RTL4Q6ZR62 310 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 HASPINQ8TF76 798 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 KAT2AQ92830 837 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 CELF6Q96J87 481 aaKnown RBP12.89□□□□□ -0.35
USP47-202ENST00000339865 ZNF607Q96SK3 696 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 LRMDAQ9H2I8 198 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 PCDHB12Q9Y5F1 795 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 CTTNBP2Q8WZ74 1663 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 FBXO21O94952 628 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 UQCRC1P31930 480 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 CDK7P50613 346 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 LACTB2Q53H82 288 aaPredicted RBP12.89□□□□□ -0.35
USP47-202ENST00000339865 QSOX2Q6ZRP7 698 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 LINGO2Q7L985 606 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 SLC41A1Q8IVJ1 513 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 PHC3Q8NDX5 983 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 ZNF563Q8TA94 476 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 LPIN3Q9BQK8 851 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 ZNF700Q9H0M5 742 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 AXIN2Q9Y2T1 843 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 SNRNP200O75643 2136 aaKnown RBP12.89□□□□□ -0.35
USP47-202ENST00000339865 SLC30A4O14863 429 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 PPP1R26Q5T8A7 1209 aaPredicted RBP12.89□□□□□ -0.35
USP47-202ENST00000339865 KCNK18Q7Z418 384 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 PARGQ86W56 976 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 MSL3Q8N5Y2 521 aaKnown RBP12.89□□□□□ -0.35
USP47-202ENST00000339865 LPCAT1Q8NF37 534 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 MRPS31Q92665 395 aaKnown RBP12.89□□□□□ -0.35
USP47-202ENST00000339865 CCDC120Q96HB5 630 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 NOL11Q9H8H0 719 aaKnown RBP12.89□□□□□ -0.35
USP47-202ENST00000339865 KCND2Q9NZV8 630 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 CDH7Q9ULB5 785 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 ZNF318Q5VUA4 2279 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 MOXD2PA6NHM9 499 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 IGFALSP35858 605 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 HNF4AP41235 474 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 BCAT1P54687 386 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 SLC12A3P55017 1021 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 FOXR2Q6PJQ5 311 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 MGME1Q9BQP7 344 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 THG1LQ9NWX6 298 aaKnown RBP12.89□□□□□ -0.35
USP47-202ENST00000339865 FARSAQ9Y285 508 aaKnown RBP12.89□□□□□ -0.35
USP47-202ENST00000339865 POFUT2Q9Y2G5 429 aa12.89□□□□□ -0.35
USP47-202ENST00000339865 ABCA5Q8WWZ7 1642 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 A0A087WZ62 844 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 CHST10O43529 356 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 ATP6V1G1O75348 118 aa12.88□□□□□ -0.35
USP47-202ENST00000339865 MEA1Q16626 185 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms